Evidence map›Paper›PMID 33578947›Full record

ArticleInternational journal of molecular sciences2021

Adipose Tissue Gene Expression of Entire Male, Immunocastrated and Surgically Castrated Pigs.

Klavdija Poklukar, Marjeta Čandek-Potokar, Milka Vrecl, Nina Batorek-Lukač, Gregor Fazarinc, Kevin Kress, Volker Stefanski, Martin Škrlep

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Klavdija PoklukarAgricultural Institute of Slovenia, Hacquetova ulica 17, 1000 Ljubljana, Slovenia.ORCID 0000-0001-5360-1860
Marjeta Čandek-PotokarAgricultural Institute of Slovenia, Hacquetova ulica 17, 1000 Ljubljana, Slovenia.ORCID 0000-0003-0231-126X
Milka VreclInstitute of Preclinical Sciences, Veterinary Faculty, University of Ljubljana, Gerbičeva ulica 60, 1000 Ljubljana, Slovenia.
Nina Batorek-LukačAgricultural Institute of Slovenia, Hacquetova ulica 17, 1000 Ljubljana, Slovenia.ORCID 0000-0002-7198-8728
Gregor FazarincInstitute of Preclinical Sciences, Veterinary Faculty, University of Ljubljana, Gerbičeva ulica 60, 1000 Ljubljana, Slovenia.
Kevin KressBehavioural Physiology of Livestock, Institute of Animal Science, University of Hohenheim, Garbenstrasse 17, 70599 Stuttgart, Germany.
Volker StefanskiBehavioural Physiology of Livestock, Institute of Animal Science, University of Hohenheim, Garbenstrasse 17, 70599 Stuttgart, Germany.
Martin ŠkrlepAgricultural Institute of Slovenia, Hacquetova ulica 17, 1000 Ljubljana, Slovenia.ORCID 0000-0002-8252-8022
Agricultural institute of Slovenia · SIUniversity of Hohenheim · DEUniversity of Ljubljana · SIUniversity of Maribor · SI

Funding

Bundesanstalt für Landwirtschaft und Ernährung 696231Horizon 2020 Framework Programme ERA-NET SusAnJavna Agencija za Raziskovalno Dejavnost RS P4-0133, P4-0053, Z7-9461, PhD scholarship for KPMinistrstvo za Kmetijstvo in Okolje 696231
6 · The paper itself

Abstract

Differences in adipose tissue deposition and properties between pig male sex categories, i.e., entire males (EM), immunocastrates (IC) and surgical castrates (SC) are relatively well-characterized, whereas the underlying molecular mechanisms are still not fully understood. To gain knowledge about the genetic regulation of the differences in adipose tissue deposition, two different approaches were used: RNA-sequencing and candidate gene expression by quantitative PCR. A total of 83 differentially expressed genes were identified between EM and IC, 15 between IC and SC and 48 between EM and SC by RNA-sequencing of the subcutaneous adipose tissue. Comparing EM with IC or SC, upregulated genes related to extracellular matrix dynamics and adipogenesis, and downregulated genes involved in the control of lipid and carbohydrate metabolism were detected. Differential gene expression generally indicated high similarity between IC and SC as opposed to EM, except for several heat shock protein genes that were upregulated in EM and IC compared with SC. The candidate gene expression approach showed that genes involved in lipogenesis were downregulated in EM compared with IC pigs, further confirming RNA-sequencing results.

Indexed as

TranscriptomeAdipose TissueAnimalsCastrationGene ExpressionMaleSequence Analysis, RNASwineadipose tissueentire malesexpressionimmunocastrationpigsRNA-sequencingsurgical castration

Identifiers

PMID33578947
PMCPMC7916650
OpenAlexW3126642636

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.