Evidence map›Paper›PMID 33578415›Full record

ArticleJournal of experimental botany2021

Resolving a QTL complex for height, heading, and grain yield on chromosome 3A in bread wheat.

Alba Farre Martinez, Clare Lister, Sue Freeman, Jun Ma, Simon Berry, Luzie Wingen, Simon Griffiths

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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  7. Review
  8. Identification of QTLs for wheat heading time across multiple-environments.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Alba Farre MartinezJohn Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
Clare ListerJohn Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
Sue FreemanJohn Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
Jun MaCollege of Agronomy and Biotechnology, China Agricultural University, Beijing, 100094, China.
Simon BerryLimagrain UK, Woolpit Business Park, Woolpit, Bury St Edmunds, Suffolk,UK.
Luzie WingenJohn Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
Simon GriffithsJohn Innes Centre, Colney Lane, Norwich NR4 7UH, UK.
John Innes Centre · GBChina Agricultural University · CNLimagrain (United Kingdom) · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H009698/1Biotechnology and Biological Sciences Research Council BBS/E/J/000C0617Biotechnology and Biological Sciences Research Council BBS/E/J/000CA393Biotechnology and Biological Sciences Research Council BBS/E/J/000CA399
6 · The paper itself

Abstract

Crop height (Ht), heading date (Hd), and grain yield (GY) are inter-related in wheat. Independent manipulation of each is important for adaptation and performance. Validated quantitative trait loci (QTLs) for all three co-locate on chromosome 3A in the Avalon×Cadenza population, with increased Ht, Hd, and GY contributed by Cadenza. We asked if these are linked or pleiotropic effects using recombinant lines, and showed that Ht and Hd effects are independent. The Chinese Spring equivalent to the newly defined Ht interval contained a gene cluster involved in cell wall growth and displaying high levels of differential transcript expression. The Hd locus is larger and rearranged compared with the reference genome, but FT2 (Flowering Locus T2) is of particular interest. The Hd effect acted independently of photoperiod and vernalization, but did exhibit seasonal genotype×environment interaction. Recombinants were phenotyped for GY in replicated field experiments. GY was most associated with Cadenza alleles for later Hd, supporting physiological studies using the same lines proposing that 'late' alleles at this locus increase spike fertility and grain number (GN). The work has uncoupled height from heading and yield, and shown that one of very few validated GY QTLs in wheat is probably mediated by phenological variation.

Indexed as

Quantitative Trait LociTriticumBreadChromosome MappingChromosomesPhenotypeAvalonCadenzacell wallearliness per sefloweringheightQTLwheatyield

Identifiers

PMID33578415
PMCPMC8023219
OpenAlexW3127531952

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.