Evidence map›Paper›PMID 33577589›Full record

ArticlePloS one2021

Engineered degradation of EYFP-tagged CENH3 via the 26S proteasome pathway in plants.

Eberhard Sorge, Dmitri Demidov, Inna Lermontova, Andreas Houben, Udo Conrad

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Eberhard SorgeLeibniz Institute for Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.ORCID 0000-0003-2669-9430
Dmitri DemidovLeibniz Institute for Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Inna LermontovaLeibniz Institute for Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Andreas HoubenLeibniz Institute for Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Udo ConradLeibniz Institute for Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) · DECentral European Institute of Technology – Masaryk University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Determining the function of proteins remains a key task of modern biology. Classical genetic approaches to knocking out protein function in plants still face limitations, such as the time-consuming nature of generating homozygous transgenic lines or the risk of non-viable loss-of-function phenotypes. We aimed to overcome these limitations by acting downstream of the protein level. Chimeric E3 ligases degrade proteins of interest in mammalian cell lines, Drosophila melanogaster embryos, and transgenic tobacco. We successfully recruited the 26S proteasome pathway to directly degrade a protein of interest located in plant nuclei. This success was achieved via replacement of the interaction domain of the E3 ligase adaptor protein SPOP (Speckle-type POZ adapter protein) with a specific anti-GFP nanobody (VHHGFP4). For proof of concept, the target protein CENH3 of A. thaliana fused to EYFP was subjected to nanobody-guided proteasomal degradation in planta. Our results show the potential of the modified E3-ligase adapter protein VHHGFP4-SPOP in this respect. We were able to point out its capability for nucleus-specific protein degradation in plants.

Indexed as

Protein EngineeringProteolysisArabidopsisArabidopsis ProteinsCell LineHistonesNicotianaPlants, Genetically ModifiedProteasome Endopeptidase ComplexRecombinant Fusion ProteinsArabidopsis ProteinsATP dependent 26S proteaseHistonesProteasome Endopeptidase ComplexRecombinant Fusion Proteins

Identifiers

PMID33577589
PMCPMC7880479
OpenAlexW3126155817

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.