Evidence map›Paper›PMID 33576883›Full record

ArticleApplied microbiology and biotechnology2021

Identification of new proteins related with cisplatin resistance in Saccharomyces cerevisiae.

Antonio M Burgos-Molina, Silvia Mercado-Sáenz, Casimiro Cárdenas, Beatriz López-Díaz, Francisco Sendra-Portero, Miguel J Ruiz-Gómez

Abstract read
PubMed Publisher
In one paragraph

Article in Applied microbiology and biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Antonio M Burgos-MolinaLaboratorio de Radiobiología, Departamento de Radiología y Medicina Física, Facultad de Medicina, Universidad de Málaga, Bulevar Louis Pasteur 32, 29010, Málaga, Spain.ORCID https://orcid.org/0000-0001-5663-5134
Silvia Mercado-SáenzLaboratorio de Radiobiología, Departamento de Radiología y Medicina Física, Facultad de Medicina, Universidad de Málaga, Bulevar Louis Pasteur 32, 29010, Málaga, Spain.ORCID https://orcid.org/0000-0002-0002-8471
Casimiro CárdenasServicios Centrales de Apoyo a la Investigación (SCAI), Universidad de Málaga, Bulevar Louis Pasteur 33, 29010, Málaga, Spain.ORCID https://orcid.org/0000-0001-6259-8296
Beatriz López-DíazLaboratorio de Radiobiología, Departamento de Radiología y Medicina Física, Facultad de Medicina, Universidad de Málaga, Bulevar Louis Pasteur 32, 29010, Málaga, Spain.ORCID https://orcid.org/0000-0001-5176-1852
Francisco Sendra-PorteroLaboratorio de Radiobiología, Departamento de Radiología y Medicina Física, Facultad de Medicina, Universidad de Málaga, Bulevar Louis Pasteur 32, 29010, Málaga, Spain.ORCID https://orcid.org/0000-0001-9535-9806
Miguel J Ruiz-GómezLaboratorio de Radiobiología, Departamento de Radiología y Medicina Física, Facultad de Medicina, Universidad de Málaga, Bulevar Louis Pasteur 32, 29010, Málaga, Spain. mjrg@uma.es.ORCID http://orcid.org/0000-0003-4630-7588
Universidad de Málaga · ES

Funding

Plan Andaluz de Investigación, Desarrollo e Innovación (PAIDI); Junta de Andalucía CTS-181
6 · The paper itself

Abstract

The aim of this study is to select a cisplatin-resistant Saccharomyces cerevisiae strain to look for new molecular markers of resistance and the identification of mechanisms/interactions involved. A resistant strain was obtained after 80 days of cisplatin exposure. Then, total protein extraction, purification, and identification were carried out, in wild-type (wt) and resistant strains, by tandem mass spectrometry using a "nano HPLC-ESI-MS/MS" ion trap system. The increase in the exponentially modified protein abundance index (emPAI) (resistant vs wt strains) was calculated to study the increase in protein expression. "Genemania" software ( http://www.Genemania.org/ ) was used to compare the effects, functions, and protein interactions. KEGG tool was used for metabolic pathway analysis. Data are available via ProteomeXchange with identifier PXD020665. The cisplatin-resistant strain showed 2.5 times more resistance than the wt strain for the inhibitory dose 50% (ID50) value (224 μg/ml vs 89.68 μg/ml) and 2.78 times more resistant for the inhibitory dose 90% (ID90) value (735.2 μg/ml vs 264.04 μg/ml). Multiple deregulated proteins were found in the glutathione and carbon metabolism, oxidative phosphorylation, proteasome, glycolysis and gluconeogenesis, glyoxylate metabolism, fatty acid degradation pathway, citric acid cycle, and ribosome. The most overexpressed proteins in the cisplatin-resistant strain were related to growth and metabolism (QCR2, QCR1, ALDH4, ATPB, ATPA, ATPG, and PCKA), cell structure (SCW10), and thermal shock (HSP26). The results suggest that these proteins could be involved in cisplatin resistance. The resistance acquisition process is complex and involves the activation of multiple mechanisms that interact together. KEY POINTS: • Identification of new proteins/genes related to cisplatin resistance • Increased expression of QCR2/QCR1/ALDH4/ATPB/ATPA/SCW10/HSP26/ATPG and PCKA proteins • Multiple molecular mechanisms that interact together are involved in resistance.

Indexed as

CisplatinSaccharomyces cerevisiae ProteinsHeat-Shock ProteinsProteomicsSaccharomyces cerevisiaeTandem Mass SpectrometryCisplatinHeat-Shock ProteinsHSP26 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsCisplatinProteomicsResistanceS. cerevisiaeYeast

Identifiers

PMID33576883
OpenAlexW3128208636

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.