Evidence map›Paper›PMID 33575923›Full record

ArticleClinical rheumatology2021

Mayan alleles of the HLA-DRB1 major histocompatibility complex might contribute to the genetic susceptibility to systemic lupus erythematosus in Mexican patients from Tapachula, Chiapas.

Rafael Garcia-Silva, Susana Hernandez-Doño, Jeniffer Patricia Román-Amparo, Ma Guadalupe Trujillo-Vizuet, Blanca Aurora Mena-Vela, Andrea Rizo-Pinto, José Manuel Pérez Tirado, José Hiram Cetina-Díaz, Pedro Bulos-Rodríguez, Julio Granados and 1 more

Abstract read
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In one paragraph

Article in Clinical rheumatology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Rafael Garcia-SilvaDepartment of Transplantation, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, Mexico City, Mexico.ORCID https://orcid.org/0000-0002-4537-3180
Susana Hernandez-DoñoDepartment of Transplantation, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, Mexico City, Mexico.ORCID https://orcid.org/0000-0002-6949-7081
Jeniffer Patricia Román-AmparoResearch Division, Hospital Regional de Alta Especialidad "Ciudad Salud", Tapachula, Chiapas, Mexico.ORCID https://orcid.org/0000-0003-3653-1412
Ma Guadalupe Trujillo-VizuetEscuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Ciudad de México, Ciudad de México, Mexico.ORCID https://orcid.org/0000-0001-8512-2530
Blanca Aurora Mena-VelaInternal Medicine Department, Hospital Regional de Alta Especialidad "Ciudad Salud", Tapachula, Chiapas, Mexico.ORCID https://orcid.org/0000-0001-8225-0422
Andrea Rizo-PintoResearch Division, Hospital Regional de Alta Especialidad "Ciudad Salud", Tapachula, Chiapas, Mexico.ORCID https://orcid.org/0000-0002-2120-0875
José Manuel Pérez TiradoHospital Regional de Alta Especialidad Ciudad Salud, Centro Regional de Alta Especialidad de Chiapas, Carretera Puerto Madero s / n Km 15-200, C.P. 30830, Puerto Madero, Tapachula, Chiapas, Mexico.ORCID https://orcid.org/0000-0003-1945-7919
José Hiram Cetina-DíazInternal Medicine Department, Hospital Regional de Alta Especialidad "Ciudad Salud", Tapachula, Chiapas, Mexico.ORCID https://orcid.org/0000-0003-0908-5218
Pedro Bulos-RodríguezInternal Medicine Department, Hospital Regional de Alta Especialidad "Ciudad Salud", Tapachula, Chiapas, Mexico.
Julio GranadosDepartment of Transplantation, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, Mexico City, Mexico.ORCID https://orcid.org/0000-0001-8553-1027
Jesús Sepúlveda-DelgadoResearch Division, Hospital Regional de Alta Especialidad "Ciudad Salud", Tapachula, Chiapas, Mexico. jesussd52@gmail.com.ORCID http://orcid.org/0000-0003-1393-653X
Hospitales Regionales de Alta Especialidad · MXInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXInstituto Politécnico Nacional · MX

Funding

Centro Regional de Alta Especialidad de Chiapas 2019 12 M7A 3 3 01 00 024 E022 25901
6 · The paper itself

Abstract

introductionSystemic lupus erythematosus (SLE) is the prototypic autoimmune disease that disrupts numerous immunity mechanisms with the potential to exert damage to any organ or tissue. Its etiology remains uncertain; however, genetic and environmental factors that differ between populations strongly influence its development. Among the physiopathogenic factors, the genetic ones predominate, notably the major histocompatibility complex (MHC) loci. A high degree of ethnical admixture makes Mexican Mestizos a thoroughly genetically heterogeneous population. Therefore, this study aimed to identify the MHC polymorphisms associated with SLE development in Mexican Mestizos from Southern Mexico and compare them with patients from Mexico City.

methodA transversal study in SLE patients from Tapachula, Chiapas, was conducted. DNA typing of human leukocyte antigens (HLA) classes I and II was performed using single specific primers (SSP). Admixture analysis was performed using the population genetics LEADMIX software.

resultsThe frequencies of HLA-DRB1*16 and HLA-DQB1*05 were found to have a tendency towards increase in SLE patients, compared to ethnically matched healthy controls. The allele HLA-DRB1*03 seemed to be less associated with SLE in this group of Mexican Mestizos, opposed to other more Caucasian populations. Admixture analysis showed a higher Mayan genetic component in these patients from Chiapas.

conclusionsThe genetic susceptibility for SLE differed in two populations of Mexican Mestizos with dissimilar ethnic ancestries. Autochthonous Amerindian alleles, and not the more widely known Caucasian alleles, might be associated with the susceptibility to SLE in Mexican Mestizos from Tapachula, Chiapas. Key Points • Autochthonous Amerindian alleles, such as HLA-DRB1*16, had a tendency to be increased in SLE patients, compared to healthy controls. • SLE susceptibility alleles vary considerably among regions in Mexico, according to the distribution of the indigenous groups. • Ethnic admixture is a key determinant in the genetic susceptibility of SLE.

Indexed as

Genetic Predisposition to DiseaseHLA-DRB1 ChainsLupus Erythematosus, SystemicAllelesGene FrequencyHaplotypesHumansMajor Histocompatibility ComplexMexicoHLA-DRB1 ChainsHLAImmunogeneticsMexican MestizosSystemic lupus erythematosus

Identifiers

PMID33575923
OpenAlexW3127485465

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.