Evidence map›Paper›PMID 33571780›Full record

ReviewComputerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society2021

Analyzing magnetic resonance imaging data from glioma patients using deep learning.

Bjoern Menze, Fabian Isensee, Roland Wiest, Bene Wiestler, Klaus Maier-Hein, Mauricio Reyes, Spyridon Bakas

Abstract readReview
In one paragraph

Review in Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Application of Deep Learning Technology in Glioma.Journal of healthcare engineering · 2022
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bjoern MenzeQuantitative Biomedicine, University of Zurich, Zurich, Switzerland. Electronic address: bjoern.menze@uzh.ch.
Fabian IsenseeDKFZ, Heidelberg, Germany. Electronic address: f.isensee@dkfz-heidelberg.de.
Roland WiestSupport Center for Advanced Neuroimaging, Institute of Diagnostic and Interventional Neuroradiology, Inselspital, Bern, Switzerland. Electronic address: roland.wiest@insel.ch.
Bene WiestlerNeuroradiology, TUM, Munich, Germany. Electronic address: b.wiestler@tum.de.
Klaus Maier-HeinDKFZ, Heidelberg, Germany. Electronic address: k.maier-hein@dkfz-heidelberg.de.
Mauricio ReyesData Science Center, Inselspital, Bern, Switzerland. Electronic address: mauricio.reyes@med.unibe.ch.
Spyridon BakasCenter for Biomedical Image Computing and Analytics (CBICA), University of Pennsylvania, Philadelphia, PA, USA. Electronic address: sbakas@upenn.edu.

Funding

Statistical atlases of brain tumor MRI:do imaging phenotypes predict progression?R01NS042645 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI DAVATZIKOS, CHRISTOS · 2002 to 2024
$8.7M
Cancer imaging phenomics software suite: application to brain and breast cancerU24CA189523 · NCI · UNIVERSITY OF PENNSYLVANIA · PI DAVATZIKOS, CHRISTOS, KONTOS, DESPINA · 2015 to 2019
$3.2M
Biomedical Image Computing and Informatics ClusterS10OD023495 · OD · UNIVERSITY OF PENNSYLVANIA · PI DAVATZIKOS, CHRISTOS · 2017 to 2017
$1.9M
The Federated Tumor Segmentation (FeTS) platform: An intuitive tool facilitating secure multi-institutional collaborationU01CA242871 · NCI · UNIVERSITY OF PENNSYLVANIA · PI BAKAS, SPYRIDON · 2019 to 2021
$1.1M
NCI NIH HHS U01 CA242871NCI NIH HHS U24 CA189523NIH HHS S10 OD023495NINDS NIH HHS R01 NS042645
6 · The paper itself

Abstract

The quantitative analysis of images acquired in the diagnosis and treatment of patients with brain tumors has seen a significant rise in the clinical use of computational tools. The underlying technology to the vast majority of these tools are machine learning methods and, in particular, deep learning algorithms. This review offers clinical background information of key diagnostic biomarkers in the diagnosis of glioma, the most common primary brain tumor. It offers an overview of publicly available resources and datasets for developing new computational tools and image biomarkers, with emphasis on those related to the Multimodal Brain Tumor Segmentation (BraTS) Challenge. We further offer an overview of the state-of-the-art methods in glioma image segmentation, again with an emphasis on publicly available tools and deep learning algorithms that emerged in the context of the BraTS challenge.

Indexed as

Brain NeoplasmsDeep LearningGliomaAlgorithmsHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingNeural Networks, ComputerBrain tumorBrain tumor segmentation challengeBraTSDeep learningGliomaImage quantificationImage segmentationMachine learningNeuroOncology

Identifiers

PMID33571780
PMCPMC8040671

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.