Evidence map›Paper›PMID 33571421›Full record

ArticleAmerican journal of human genetics2021

Genetic control of the human brain proteome.

Chloe Robins, Yue Liu, Wen Fan, Duc M Duong, Jacob Meigs, Nadia V Harerimana, Ekaterina S Gerasimov, Eric B Dammer, David J Cutler, Thomas G Beach and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 2 pooled it
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 2 syntheses or guidelines pooled it, 112 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Estimating protein isoform abundances with [Formula: see text].Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Proteogenomics in human populations.Nature reviews. Genetics · 2026
    Review
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  17. Review
  18. The activity and expression of adenylosuccinate lyase were reduced during modern human evolution, affecting brain and behavior.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  19. Article
  20. Multiomics integration prioritizes potential drug targets for multiple sclerosis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Chloe RobinsDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Yue LiuDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Wen FanDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Duc M DuongDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Jacob MeigsDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Nadia V HarerimanaDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Ekaterina S GerasimovDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Eric B DammerDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.
David J CutlerDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA 30322, USA.
Thomas G BeachBanner Sun Health Research Institute, Sun City, AZ 85351, USA.
Eric M ReimanBanner Alzheimer's Institute, Arizona State University and University of Arizona, Phoenix, AZ 85351, USA.
Philip L De JagerCenter for Translational and Computational Neuroimmunology, Department of Neurology, Columbia University Medical Center, New York, NY 10032, USA.
David A BennettRush Alzheimer Disease Center, Rush University Medical Center, Chicago, IL 60612, USA.
James J LahDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Aliza P WingoDivision of Mental Health, Atlanta VA Medical Center, Decatur, GA 30033, USA; Department of Psychiatry, Emory University School of Medicine, Atlanta, GA 30322, USA.
Allan I LeveyDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Nicholas T SeyfriedDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA. Electronic address: nseyfri@emory.edu.
Thomas S WingoDepartment of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA; Department of Human Genetics, Emory University School of Medicine, Atlanta, GA 30322, USA. Electronic address: thomas.wingo@emory.edu.
Emory University · USArizona State University · USBanner Sun Health Research Institute · USColumbia University Irving Medical Center · USRush University Medical Center · US

Funding

Early Onset AD Consortium - the LEAD Study (LEADS)U01AG057195 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI APOSTOLOVA, LIANA G, CARRILLO, MARIA C · 2018 to 2023
$70.3M
Alzheimer's Disease Genetics ConsortiumU01AG032984 · NIA · UNIVERSITY OF PENNSYLVANIA · PI SCHELLENBERG, GERARD DAVID · 2009 to 2024
$60.4M
SUPPLEMENT TO RUSH ALZHEIMERS DISEASE CENTER COREP30AG010161 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BARNES, LISA L · 1991 to 2020
$49.1M
EPIDEMIOLOGY OF NEURAL RESERVE AND NEUROBIOLOGY IN AGINGR01AG017917 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 2001 to 2023
$43.3M
Research Education ComponentP30AG019610 · NIA · SUN HEALTH RESEARCH INSTITUTE · PI REIMAN, ERIC MICHAEL · 2001 to 2020
$32.5M
The Goizueta Alzheimer's Disease Research CenterP30AG066511 · NIA · EMORY UNIVERSITY · PI Amy D Rodriguez · 2020 to 2026
$29.0M
The Emory Alzheimer's Disease CenterP50AG025688 · NIA · EMORY UNIVERSITY · PI WALKER, LARY C · 2005 to 2019
$25.7M
Research Education ComponentP30AG072980 · NIA · BANNER HEALTH · PI Nicholas Ashton · 2021 to 2026
$24.9M
RISK FACTORS, PATHOLOGY, AND CLINICAL EXPRESSIONS OF ADR01AG015819 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 1998 to 2024
$21.4M
Multi-omic network-directed proteoform discovery, dissection and functional validation to prioritize novel AD therapeutic targetsU01AG061356 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BENNETT, DAVID ALAN, DE JAGER, PHILIP L · 2018 to 2022
$13.7M
Pathway discovery, validation and compound identification for Alzheimer's disease - SupplementU01AG046152 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BENNETT, DAVID ALAN, DE JAGER, PHILIP L · 2013 to 2017
$13.6M
Supplement to AMP-AD Brain Proteomic Network Enhancement, Validation and Translation into CSF BiomarkersU01AG061357 · NIA · EMORY UNIVERSITY · PI LEVEY, ALLAN I, SEYFRIED, NICHOLAS THOMAS · 2018 to 2022
$9.1M
BLRD VA I01 BX003853NIA NIH HHS P30 AG010161NIA NIH HHS P30 AG019610NIA NIH HHS P30 AG066511NIA NIH HHS P30 AG072980NIA NIH HHS P50 AG025688NIA NIH HHS R01 AG015819NIA NIH HHS R01 AG017917NIA NIH HHS R01 AG030146NIA NIH HHS R01 AG036042NIA NIH HHS R01 AG036836NIA NIH HHS R01 AG056533NIA NIH HHS R56 AG060757NIA NIH HHS R56 AG062256NIA NIH HHS R56 AG062633NIA NIH HHS RF1 AG051633NIA NIH HHS U01 AG032984NIA NIH HHS U01 AG046152NIA NIH HHS U01 AG057195NIA NIH HHS U01 AG061356NIA NIH HHS U01 AG061357NIMH NIH HHS U01 MH115484NINDS NIH HHS T32 NS007480NINDS NIH HHS U24 NS072026
6 · The paper itself

Abstract

We generated an online brain pQTL resource for 7,376 proteins through the analysis of genetic and proteomic data derived from post-mortem samples of the dorsolateral prefrontal cortex of 330 older adults. The identified pQTLs tend to be non-synonymous variation, are over-represented among variants associated with brain diseases, and replicate well (77%) in an independent brain dataset. Comparison to a large study of brain eQTLs revealed that about 75% of pQTLs are also eQTLs. In contrast, about 40% of eQTLs were identified as pQTLs. These results are consistent with lower pQTL mapping power and greater evolutionary constraint on protein abundance. The latter is additionally supported by observations of pQTLs with large effects' tending to be rare, deleterious, and associated with proteins that have evidence for fewer protein-protein interactions. Mediation analyses using matched transcriptomic and proteomic data provided additional evidence that pQTL effects are often, but not always, mediated by mRNA. Specifically, we identified roughly 1.6 times more mRNA-mediated pQTLs than mRNA-independent pQTLs (550 versus 341). Our pQTL resource provides insight into the functional consequences of genetic variation in the human brain and a basis for novel investigations of genetics and disease.

Indexed as

AutopsyBrainFemaleGene Expression RegulationGenetic VariationGenome-Wide Association StudyGenotypeHumansMaleProteomeProteomicsQuantitative Trait LociRNA, MessengerTranscriptomeProteomeRNA, MessengerbraineQTLexpressiongene regulationpQTLproteomicsquantitative trait locus

Identifiers

PMID33571421
PMCPMC8008492
OpenAlexW3128936277

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.