Evidence map›Paper›PMID 33570655›Full record

ArticleThe Plant cell2021

Spatiotemporal control of miR398 biogenesis, via chromatin remodeling and kinase signaling, ensures proper ovule development.

Hanyang Cai, Liping Liu, Man Zhang, Mengnan Chai, Youmei Huang, Fangqian Chen, Maokai Yan, Zhenxia Su, Ian Henderson, Ravishankar Palanivelu and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Comprehensive Analysis ofInternational journal of molecular sciences · 2024
    Article
  7. Article
  8. Beyond Loading: Functions of Plant ARGONAUTE Proteins.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Article
  11. PMT6 Is Required for SWC4 in Positively Modulating Pepper Thermotolerance.International journal of molecular sciences · 2023
    Article
  12. MicroRNA398: A Master Regulator of Plant Development and Stress Responses.International journal of molecular sciences · 2022
    Review
  13. Revisiting small RNA movement in plants.Nature reviews. Molecular cell biology · 2022
    Article
  14. Review
  15. Big Role of Small RNAs in Female Gametophyte Development.International journal of molecular sciences · 2022
    Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Hanyang CaiCollege of Life Science, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0002-6091-888X
Liping LiuCollege of Life Science, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0003-1009-8868
Man ZhangCollege of Life Science, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0003-1365-8015
Mengnan ChaiCollege of Life Science, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0002-1996-4294
Youmei HuangCollege of Life Science, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0002-2968-0359
Fangqian ChenCollege of Life Science, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0003-4570-0089
Maokai YanState Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Lab of Sugarcane Biology, College of Agriculture, Guangxi University, Nanning 530004, China.ORCID 0000-0001-6528-2537
Zhenxia SuCollege of Life Science, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0002-6821-8597
Ian HendersonDepartment of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, United Kingdom.ORCID 0000-0001-5066-1489
Ravishankar PalaniveluSchool of Plant Sciences, University of Arizona, Tucson, AZ 85721, United States.ORCID 0000-0003-0564-5564
Xuemei ChenDepartment of Botany and Plant Sciences, Institute of Integrative Genome Biology, University of California, Riverside, CA 92521, United States.ORCID 0000-0002-5209-1157
Yuan QinCollege of Life Science, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou 350002, China.ORCID 0000-0003-4713-6151
Fujian Agriculture and Forestry University · CNGuangxi University · CNUniversity of Arizona · USUniversity of California, Riverside · USUniversity of Cambridge · GB

Funding

Role of microtubules in the non-cell autonomous activities of plant microRNAsR01GM129373 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI CHEN, XUEMEI · 2018 to 2021
$1.2M
NIGMS NIH HHS R01 GM129373NIH HHS GM129373
6 · The paper itself

Abstract

The coordinated development of sporophytic and gametophytic tissues is essential for proper ovule patterning and fertility. However, the mechanisms regulating their integrated development remain poorly understood. Here, we report that the Swi2/Snf2-Related1 (SWR1) chromatin-remodeling complex acts with the ERECTA receptor kinase-signaling pathway to control female gametophyte and integument growth in Arabidopsis thaliana by inhibiting transcription of the microRNA gene MIR398c in early-stage megagametogenesis. Moreover, pri-miR398c is transcribed in the female gametophyte but is then translocated to and processed in the ovule sporophytic tissues. Together, SWR1 and ERECTA also activate ARGONAUTE10 (AGO10) expression in the chalaza; AGO10 sequesters miR398, thereby ensuring the expression of three AGAMOUS-LIKE (AGL) genes (AGL51, AGL52, and AGL78) in the female gametophyte. In the context of sexual organ morphogenesis, these findings suggest that the spatiotemporal control of miRNA biogenesis, resulting from coordination between chromatin remodeling and cell signaling, is essential for proper ovule development in Arabidopsis.

Indexed as

Gene Expression Regulation, DevelopmentalGene Expression Regulation, PlantSignal TransductionArabidopsisArabidopsis ProteinsChromatin Assembly and DisassemblyMicroRNAsModels, BiologicalMutationOvuleProtein Serine-Threonine KinasesReceptors, Cell SurfaceTime FactorsTranscription, GeneticArabidopsis ProteinsER protein, ArabidopsisMicroRNAsMIRN398 microRNA, ArabidopsisProtein Serine-Threonine KinasesReceptors, Cell Surface

Identifiers

PMID33570655
PMCPMC8254498
OpenAlexW3126296828

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.