Evidence map›Paper›PMID 33568762›Full record

ArticleScientific reports2021

A dynamic lesion model for differentiation of malignant and benign pathologies.

Weiguo Cao, Zhengrong Liang, Yongfeng Gao, Marc J Pomeroy, Fangfang Han, Almas Abbasi, Perry J Pickhardt

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Weiguo CaoDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY, USA.
Zhengrong LiangDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY, USA. jerome.liang@sunysb.edu.
Yongfeng GaoDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY, USA.
Marc J PomeroyDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY, USA.
Fangfang HanSchool of Biomedical Engineering, Southern Medical University, Guangzhou, 510515, Guangdong, People's Republic of China.
Almas AbbasiDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY, USA.
Perry J PickhardtDepartment of Radiology, School of Medicine, University of Wisconsin, Madison, WI, USA.

Funding

(PQ6) Radiogenomics of colorectal polyps to assess benign proliferative vs. premalignant states.R01CA220004 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY, HALBERG, RICHARD BROTT · 2017 to 2021
$3.2M
Advancing Virtual Colonoscopy for Early Cancer ScreeningR01CA206171 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI LIANG, JEROME Z · 2016 to 2020
$2.0M
NCI NIH HHS R01 CA206171NCI NIH HHS R01 CA220004
6 · The paper itself

Abstract

Malignant lesions have a high tendency to invade their surrounding environment compared to benign ones. This paper proposes a dynamic lesion model and explores the 2nd order derivatives at each image voxel, which reflect the rate of change of image intensity, as a quantitative measure of the tendency. The 2nd order derivatives at each image voxel are usually represented by the Hessian matrix, but it is difficult to quantify a matrix field (or image) through the lesion space as a measure of the tendency. We conjecture that the three eigenvalues contain important information of the Hessian matrix and are chosen as the surrogate representation of the Hessian matrix. By treating the three eigenvalues as a vector, called Hessian vector, which is defined in a local coordinate formed by three orthogonal Hessian eigenvectors and further adapting the gray level occurrence computing method to extract the vector texture descriptors (or measures) from the Hessian vector, a quantitative presentation for the dynamic lesion model is completed. The vector texture descriptors were applied to differentiate malignant from benign lesions from two pathologically proven datasets: colon polyps and lung nodules. The classification results not only outperform four state-of-the-art methods but also three radiologist experts.

Indexed as

AlgorithmsColonic PolypsDiagnosis, Computer-AssistedHumansMathematical ConceptsModels, BiologicalNeoplasm InvasivenessNeoplasmsSolitary Pulmonary Nodule

Identifiers

PMID33568762
PMCPMC7875978

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.