Evidence map›Paper›PMID 33568651›Full record

ArticleNature communications2021

Replication dynamics of recombination-dependent replication forks.

Karel Naiman, Eduard Campillo-Funollet, Adam T Watson, Alice Budden, Izumi Miyabe, Antony M Carr

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 41 citations in OpenAlex.

  1. Gut microbes · 2025
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  8. The tomato gene Ty-6, encoding DNA polymerase delta subunit 1, confers broad resistance to Geminiviruses.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  9. Review
  10. RAD52 prevents accumulation ofbioRxiv : the preprint server for biology · 2024
    Article
  11. Article
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  13. Article
  14. Article
  15. eLife · 2023
    Article
  16. The Fission Yeast Mating-Type Switching Motto: "One-for-Two" and "Two-for-One".Microbiology and molecular biology reviews : MMBR · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Creation and resolution of non-B-DNA structural impediments during replication.Critical reviews in biochemistry and molecular biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Karel NaimanGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, UK. k.naiman@sussex.ac.uk.ORCID 0000-0003-3594-1516
Eduard Campillo-FunolletGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, UK.ORCID 0000-0001-7021-1610
Adam T WatsonGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, UK.
Alice BuddenGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, UK.ORCID 0000-0003-1896-3086
Izumi MiyabeGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, UK.
Antony M CarrGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, UK. a.m.carr@sussex.ac.uk.ORCID 0000-0002-2028-2389
University of Sussex · GB

Funding

Wellcome TrustWellcome Trust 110047/Z/15/Z
6 · The paper itself

Abstract

Replication forks restarted by homologous recombination are error prone and replicate both strands semi-conservatively using Pol δ. Here, we use polymerase usage sequencing to visualize in vivo replication dynamics of HR-restarted forks at an S. pombe replication barrier, RTS1, and model replication by Monte Carlo simulation. We show that HR-restarted forks synthesise both strands with Pol δ for up to 30 kb without maturing to a δ/ε configuration and that Pol α is not used significantly on either strand, suggesting the lagging strand template remains as a gap that is filled in by Pol δ later. We further demonstrate that HR-restarted forks progress uninterrupted through a fork barrier that arrests canonical forks. Finally, by manipulating lagging strand resection during HR-restart by deleting pku70, we show that the leading strand initiates replication at the same position, signifying the stability of the 3' single strand in the context of increased resection.

Indexed as

DNA ReplicationHomologous RecombinationDNA-Directed DNA PolymeraseSchizosaccharomycesSchizosaccharomyces pombe ProteinsDNA-Directed DNA PolymeraseSchizosaccharomyces pombe Proteins

Identifiers

PMID33568651
PMCPMC7876095
OpenAlexW3126280430

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.