Evidence map›Paper›PMID 33564000›Full record

ArticleScientific reports2021

Global chromatin organizer SATB1 acts as a context-dependent regulator of the Wnt/Wg target genes.

Praveena L Ramanujam, Sonam Mehrotra, Ram Parikshan Kumar, Shreekant Verma, Girish Deshpande, Rakesh K Mishra, Sanjeev Galande

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Praveena L Ramanujam *Department of Biology, Centre of Excellence in Epigenetics, Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pune, 411008, India.
Sonam Mehrotra *Department of Biology, Centre of Excellence in Epigenetics, Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pune, 411008, India.
Ram Parikshan KumarCentre for Cellular and Molecular Biology, Hyderabad, India.
Shreekant VermaCentre for Cellular and Molecular Biology, Hyderabad, India.
Girish DeshpandeDepartment of Molecular Biology, Princeton University, Princeton, NJ, 08540, USA.
Rakesh K MishraCentre for Cellular and Molecular Biology, Hyderabad, India. mishra@ccmb.res.in.
Sanjeev GalandeDepartment of Biology, Centre of Excellence in Epigenetics, Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pune, 411008, India. sanjeev@iiserpune.ac.in.
Centre for Cellular and Molecular Biology · INIndian Institute of Science Education and Research Pune · INPrinceton University · US

Funding

DBT-Wellcome Trust India Alliance IA/I/16/1/502365
6 · The paper itself

Abstract

Special AT-rich binding protein-1 (SATB1) integrates higher-order chromatin architecture with gene regulation, thereby regulating multiple signaling pathways. In mammalian cells SATB1 directly interacts with β-catenin and regulates the expression of Wnt targets by binding to their promoters. Whether SATB1 regulates Wnt/wg signaling by recruitment of β-catenin and/or its interactions with other components remains elusive. Since Wnt/Wg signaling is conserved from invertebrates to humans, we investigated SATB1 functions in regulation of Wnt/Wg signaling by using mammalian cell-lines and Drosophila. Here, we present evidence that in mammalian cells, SATB1 interacts with Dishevelled, an upstream component of the Wnt/Wg pathway. Conversely, ectopic expression of full-length human SATB1 but not that of its N- or C-terminal domains in the eye imaginal discs and salivary glands of third instar Drosophila larvae increased the expression of Wnt/Wg pathway antagonists and suppressed phenotypes associated with activated Wnt/Wg pathway. These data argue that ectopically-provided SATB1 presumably modulates Wnt/Wg signaling by acting as negative regulator in Drosophila. Interestingly, comparison of SATB1 with PDZ- and homeo-domain containing Drosophila protein Defective Proventriculus suggests that both proteins exhibit limited functional similarity in the regulation of Wnt/Wg signaling in Drosophila. Collectively, these findings indicate that regulation of Wnt/Wg pathway by SATB1 is context-dependent.

Indexed as

Wnt Signaling PathwayAnimalsDrosophila melanogasterDrosophila ProteinsHEK293 CellsHumansMatrix Attachment Region Binding ProteinsWnt1 ProteinDrosophila ProteinsMatrix Attachment Region Binding ProteinsSATB1 protein, humanwg protein, DrosophilaWnt1 Protein

Identifiers

PMID33564000
PMCPMC7873079
OpenAlexW3126965711

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.