Evidence map›Paper›PMID 33563976›Full record

ArticleCell discovery2021

A genome-wide association study for gut metagenome in Chinese adults illuminates complex diseases.

Xiaomin Liu, Shanmei Tang, Huanzi Zhong, Xin Tong, Zhuye Jie, Qiuxia Ding, Dan Wang, Ruidong Guo, Liang Xiao, Xun Xu and 11 more

Open access · goldAbstract read
In one paragraph

Article in Cell discovery, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 1 institution in 2 countries.

Xiaomin LiuBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.ORCID http://orcid.org/0000-0003-2155-3627
Shanmei TangBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Huanzi ZhongBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Xin TongBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Zhuye JieBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Qiuxia DingBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Dan WangBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Ruidong GuoBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Liang XiaoBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Xun XuBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Huanming YangBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Jian WangBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Yang ZongBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Weibin LiuBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Xiao LiuBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Yong ZhangBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Susanne BrixBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Karsten KristiansenBGI-Shenzhen, Shenzhen,, Guangdong 518083, China.
Yong HouBGI-Shenzhen, Shenzhen,, Guangdong 518083, China. houyong@genomics.cn.
Huijue JiaBGI-Shenzhen, Shenzhen,, Guangdong 518083, China. jiahuijue@genomics.cn.
Tao ZhangBGI-Shenzhen, Shenzhen,, Guangdong 518083, China. tao.zhang@genomics.cn.ORCID http://orcid.org/0000-0003-2765-2802
BGI Group (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gut microbiome has been established as a key environmental factor to health. Genetic influences on the gut microbiome have been reported, yet, doubts remain as to the significance of genetic associations. Here, we provide shotgun data for whole genome and whole metagenome from a Chinese cohort, identifying no <20% genetic contribution to the gut microbiota. Using common variants-, rare variants-, and copy number variations-based association analyses, we identified abundant signals associated with the gut microbiome especially in metabolic, neurological, and immunological functions. The controversial concept of enterotypes may have a genetic attribute, with the top two loci explaining 11% of the Prevotella-Bacteroides variances. Stratification according to gender led to the identification of differential associations in males and females. Our two-stage metagenome genome-wide association studies on a total of 1295 individuals unequivocally illustrates that neither microbiome nor GWAS studies could overlook one another in our quest for a better understanding of human health and diseases.

Identifiers

PMID33563976
PMCPMC7873036
OpenAlexW3128452969

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.