Evidence map›Paper›PMID 33562593›Full record

ArticleJournal of fungi (Basel, Switzerland)2021

A Three-Dimensional Model of the Yeast Transmembrane Sensor Wsc1 Obtained by SMA-Based Detergent-Free Purification and Transmission Electron Microscopy.

Natalia Voskoboynikova, Maria Karlova, Rainer Kurre, Armen Y Mulkidjanian, Konstantin V Shaitan, Olga S Sokolova, Heinz-Jürgen Steinhoff, Jürgen J Heinisch

Open access · goldAbstract read
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Special Issue "The Fungal Cell Wall Integrity Pathway".Journal of fungi (Basel, Switzerland) · 2023
    Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Biological insights from SMA-extracted proteins.Biochemical Society transactions · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Natalia VoskoboynikovaFaculty of Physics, University of Osnabrück, Barbarastrasse 7, D-49076 Osnabrück, Germany.ORCID 0000-0003-2317-0144
Maria KarlovaDepartment of Bioengineering, Faculty of Biology, M. V. Lomonosov Moscow State University, 119234 Moscow, Russia.
Rainer KurreCenter of Cellular Nanoanalytics, Integrated Bioimaging Facility iBiOs, Faculty of Biology/Chemistry, University of Osnabrück, Barbarastrasse 11, D-49076 Osnabrück, Germany.
Armen Y MulkidjanianFaculty of Physics, University of Osnabrück, Barbarastrasse 7, D-49076 Osnabrück, Germany.
Konstantin V ShaitanDepartment of Bioengineering, Faculty of Biology, M. V. Lomonosov Moscow State University, 119234 Moscow, Russia.ORCID 0000-0002-5137-303X
Olga S SokolovaDepartment of Bioengineering, Faculty of Biology, M. V. Lomonosov Moscow State University, 119234 Moscow, Russia.ORCID 0000-0003-4678-232X
Heinz-Jürgen SteinhoffFaculty of Physics, University of Osnabrück, Barbarastrasse 7, D-49076 Osnabrück, Germany.ORCID 0000-0002-5888-0157
Jürgen J HeinischDepartment of Genetics, Faculty of Biology/Chemistry, University of Osnabrück, Barbarastrasse 11, D-49076 Osnabrück, Germany.ORCID 0000-0003-4197-4285
Osnabrück University · DELomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cell wall sensor Wsc1 belongs to a small family of transmembrane proteins, which are crucial to sustain cell integrity in yeast and other fungi. Wsc1 acts as a mechanosensor of the cell wall integrity (CWI) signal transduction pathway which responds to external stresses. Here we report on the purification of Wsc1 by its trapping in water-soluble polymer-stabilized lipid nanoparticles, obtained with an amphipathic styrene-maleic acid (SMA) copolymer. The latter was employed to transfer tagged sensors from their native yeast membranes into SMA/lipid particles (SMALPs), which allows their purification in a functional state, i.e., avoiding denaturation. The SMALPs composition was characterized by fluorescence correlation spectroscopy, followed by two-dimensional image acquisition from single particle transmission electron microscopy to build a three-dimensional model of the sensor. The latter confirms that Wsc1 consists of a large extracellular domain connected to a smaller intracellular part by a single transmembrane domain, which is embedded within the hydrophobic moiety of the lipid bilayer. The successful extraction of a sensor from the yeast plasma membrane by a detergent-free procedure into a native-like membrane environment provides new prospects for in vitro structural and functional studies of yeast plasma proteins which are likely to be applicable to other fungi, including plant and human pathogens.

Indexed as

3D reconstructiondetergent-free extractionfluorescence correlation spectroscopymembrane sensorSMALPtransmission electron microscopyWsc1

Identifiers

PMID33562593
PMCPMC7915640
OpenAlexW3127826822

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.