Evidence map›Paper›PMID 33562410›Full record

ArticleMolecules (Basel, Switzerland)2021

Bioinformatics and Functional Analyses Implicate Potential Roles for EOGT and L-fringe in Pancreatic Cancers.

Rashu Barua, Kazuyuki Mizuno, Yuko Tashima, Mitsutaka Ogawa, Hideyuki Takeuchi, Ayumu Taguchi, Tetsuya Okajima

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Special Issue: New Insights into Protein Glycosylation.Molecules (Basel, Switzerland) · 2023
    Article
  8. Significant Roles of NotchMolecules (Basel, Switzerland) · 2022
    Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Rashu BaruaDepartment of Molecular Biochemistry, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-8550, Japan.ORCID 0000-0001-7279-2551
Kazuyuki MizunoDivision of Molecular Diagnostics, Aichi Cancer Center, 1-1 Kanokoden, Chikusa-ku, Nagoya, Aichi 464-8681, Japan.ORCID 0000-0001-8059-8433
Yuko TashimaDepartment of Molecular Biochemistry, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-8550, Japan.
Mitsutaka OgawaDepartment of Molecular Biochemistry, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-8550, Japan.ORCID 0000-0001-5808-169X
Hideyuki TakeuchiDepartment of Molecular Biochemistry, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-8550, Japan.ORCID 0000-0002-2362-5850
Ayumu TaguchiDivision of Molecular Diagnostics, Aichi Cancer Center, 1-1 Kanokoden, Chikusa-ku, Nagoya, Aichi 464-8681, Japan.
Tetsuya OkajimaDepartment of Molecular Biochemistry, Nagoya University Graduate School of Medicine, 65 Tsurumai, Showa-ku, Nagoya 466-8550, Japan.ORCID 0000-0002-3677-648X
Nagoya University · JPAichi Cancer Center · JP

Funding

Japan Society for the Promotion of Science JP19H03176Japan Society for the Promotion of Science JP19H03416Japan Society for the Promotion of Science JP19K16073Japan Society for the Promotion of Science JP19KK0195Mitsubishi Foundation N/Athe Foundation for Promotion of Cancer Research in Japan N/Athe Hori Sciences and Arts Foundation N/Athe Sasakawa Scientific Research Grant from Japan Science Society N/Athe Takeda Science Foundation N/A
6 · The paper itself

Abstract

Notch signaling receptors, ligands, and their downstream target genes are dysregulated in pancreatic ductal adenocarcinoma (PDAC), suggesting a role of Notch signaling in pancreatic tumor development and progression. However, dysregulation of Notch signaling by post-translational modification of Notch receptors remains poorly understood. Here, we analyzed the Notch-modifying glycosyltransferase involved in the regulation of the ligand-dependent Notch signaling pathway. Bioinformatic analysis revealed that the expression of epidermal growth factor (EGF) domain-specific O-linked N-acetylglucosamine (EOGT) and Lunatic fringe (LFNG) positively correlates with a subset of Notch signaling genes in PDAC. The lack of EOGT or LFNG expression inhibited the proliferation and migration of Panc-1 cells, as observed by the inhibition of Notch activation. EOGT expression is significantly increased in the basal subtype, and low expression of both EOGT and LFNG predicts better overall survival in PDAC patients. These results imply potential roles for EOGT- and LFNG-dependent Notch signaling in PDAC.

Indexed as

AdenocarcinomaCarcinoma, Pancreatic DuctalCell Line, TumorCell MovementCell ProliferationComputational BiologyGene Expression Regulation, NeoplasticGlycosyltransferasesHumansN-AcetylglucosaminyltransferasesReceptors, NotchSignal TransductionEOGT protein, humanGlycosyltransferasesLFNG protein, humanN-AcetylglucosaminyltransferasesReceptors, NotchEOGTLFNGNotchPDAC

Identifiers

PMID33562410
PMCPMC7915272
OpenAlexW3126980695

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.