Evidence map›Paper›PMID 33562358›Full record

ArticleInternational journal of molecular sciences2021

The GAUGAA Motif Is Responsible for the Binding between circSMARCA5 and SRSF1 and Related Downstream Effects on Glioblastoma Multiforme Cell Migration and Angiogenic Potential.

Davide Barbagallo, Angela Caponnetto, Cristina Barbagallo, Rosalia Battaglia, Federica Mirabella, Duilia Brex, Michele Stella, Giuseppe Broggi, Roberto Altieri, Francesco Certo and 8 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. La Tunisie medicale · 2024
    Pooled it
  2. Review
  3. Review
  4. Review
  5. Article
  6. Circular RNA in cancer.Nature reviews. Cancer · 2024
    Review
  7. Review
  8. Review
  9. Article
  10. Roles of circular RNAs in regulating the development of glioma.Journal of cancer research and clinical oncology · 2023
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Emerging roles of circular RNAs in liver cancer.JHEP reports : innovation in hepatology · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 2 countries.

Davide BarbagalloDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.ORCID 0000-0001-5331-4554
Angela CaponnettoDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.
Cristina BarbagalloDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.ORCID 0000-0002-6769-4516
Rosalia BattagliaDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.
Federica MirabellaDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.
Duilia BrexDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.
Michele StellaDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.
Giuseppe BroggiDepartment of Medical, Surgical Sciences and Advanced Technologies "G.F. Ingrassia", Section of Anatomic Pathology, University of Catania, 95123 Catania, Italy.ORCID 0000-0003-2576-6523
Roberto AltieriInterdisciplinary Research Centre on the Diagnosis and Therapy of Brain Tumors, University of Catania, 95123 Catania, Italy.ORCID 0000-0003-2671-4944
Francesco CertoInterdisciplinary Research Centre on the Diagnosis and Therapy of Brain Tumors, University of Catania, 95123 Catania, Italy.
Rosario CaltabianoDepartment of Medical, Surgical Sciences and Advanced Technologies "G.F. Ingrassia", Section of Anatomic Pathology, University of Catania, 95123 Catania, Italy.
Giuseppe Maria Vincenzo BarbagalloInterdisciplinary Research Centre on the Diagnosis and Therapy of Brain Tumors, University of Catania, 95123 Catania, Italy.ORCID 0000-0002-7760-6700
Carmelina Daniela AnfusoDepartment of Biomedical and Biotechnological Sciences, Section of Medical Biochemistry, University of Catania, 95123 Catania, Italy.
Gabriella LupoDepartment of Biomedical and Biotechnological Sciences, Section of Medical Biochemistry, University of Catania, 95123 Catania, Italy.
Marco RagusaDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.ORCID 0000-0002-4282-920X
Cinzia Di PietroDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.ORCID 0000-0002-6036-4469
Thomas Birkballe HansenDepartment of Molecular Biology and Genetics (MBG), Aarhus University, 8000 Aarhus C, Denmark.
Michele PurrelloDepartment of Biomedical and Biotechnological Sciences, Section of Biology and Genetics "Giovanni Sichel", University of Catania, 95123 Catania, Italy.ORCID 0000-0001-8873-3660
University of Catania · ITAarhus University · DK

Funding

"PIAno di inCEntivi per la RIcerca (PIA.CE.RI.) di Ateneo 2020/2022" - "linea di intervento 3, STARTING GRANT" from University of Catania STARTING GRANT
6 · The paper itself

Abstract

Circular RNAs (circRNAs) are a large class of RNAs with regulatory functions within cells. We recently showed that circSMARCA5 is a tumor suppressor in glioblastoma multiforme (GBM) and acts as a decoy for Serine and Arginine Rich Splicing Factor 1 (SRSF1) through six predicted binding sites (BSs). Here we characterized RNA motifs functionally involved in the interaction between circSMARCA5 and SRSF1. Three different circSMARCA5 molecules (Mut1, Mut2, Mut3), each mutated in two predicted SRSF1 BSs at once, were obtained through PCR-based replacement of wild-type (WT) BS sequences and cloned in three independent pcDNA3 vectors. Mut1 significantly decreased its capability to interact with SRSF1 as compared to WT, based on the RNA immunoprecipitation assay. In silico analysis through the "Find Individual Motif Occurrences" (FIMO) algorithm showed GAUGAA as an experimentally validated SRSF1 binding motif significantly overrepresented within both predicted SRSF1 BSs mutated in Mut1 (

Indexed as

Cell MovementAdenosine TriphosphatasesApoptosisBiomarkers, TumorCell ProliferationChromosomal Proteins, Non-HistoneEndothelial CellsGene Expression Regulation, NeoplasticGlioblastomaHumansNeovascularization, PathologicNucleotide MotifsPrognosisRNA, CircularSerine-Arginine Splicing FactorsTumor Cells, CulturedAdenosine TriphosphatasesBiomarkers, TumorChromosomal Proteins, Non-HistoneRNA, CircularSerine-Arginine Splicing FactorsSMARCA5 protein, humanSRSF1 protein, humanangiogenesisbinding site mutationcircSMARCA5RNA-binding proteinsSRSF1SRSF3VEGFA

Identifiers

PMID33562358
PMCPMC7915938
OpenAlexW3126993891

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.