Evidence map›Paper›PMID 33560393›Full record

ArticleBlood advances2021

A zebrafish model of granulin deficiency reveals essential roles in myeloid cell differentiation.

Clyde A Campbell, Oksana Fursova, Xiaoyi Cheng, Elizabeth Snella, Abbigail McCune, Liangdao Li, Barbara Solchenberger, Bettina Schmid, Debashis Sahoo, Mark Morton and 2 more

Open access · goldAbstract read
In one paragraph

Article in Blood advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Immune-Enhancing Effects ofCurrent issues in molecular biology · 2026
    Article
  4. Immune modulation promotes heart regeneration through macrophage and Granulin functions in medaka.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. mCell proliferation · 2023
    Article
  11. Review
  12. Zebrafish: a convenient tool for myelopoiesis research.Cell regeneration (London, England) · 2023
    Review
  13. Article
  14. Identification of chromatin states during zebrafish gastrulation using CUT&RUN and CUT&Tag.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
  15. Review
  16. Dietary Inclusion of Seabuckthorn (Frontiers in physiology · 2022
    Article
  17. Thymus-Derived CD4Journal of immunology (Baltimore, Md. : 1950) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Clyde A CampbellDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA.
Oksana FursovaDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA.
Xiaoyi ChengDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA.
Elizabeth SnellaDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA.
Abbigail McCuneDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA.
Liangdao LiSection of Cell and Developmental Biology, University of California at San Diego, San Diego, CA.
Barbara SolchenbergerGerman Center for Neurodegenerative Diseases, Munich, Germany.
Bettina SchmidGerman Center for Neurodegenerative Diseases, Munich, Germany.
Debashis SahooDepartment of Computer Science and Engineering, University of California at San Diego, San Diego, CA; and.
Mark MortonCollege of Veterinary Medicine, Iowa State University, Ames, IA.
David TraverSection of Cell and Developmental Biology, University of California at San Diego, San Diego, CA.
Raquel Espín-PalazónDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA.
Iowa State University · USUniversity of California San Diego · USGerman Center for Neurodegenerative Diseases · DE

Funding

Macrophage Polarization in Response to Infections and InflammationR01AI155696 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GHOSH, PRADIPTA, SAHOO, DEBASHIS · 2020 to 2024
$4.9M
Molecular dissection of Hematopoietic Stem Cell specification triggered by inflammatory mediatorsR01DK131162 · NIDDK · IOWA STATE UNIVERSITY · PI Raquel Espin Palazon · 2022 to 2026
$2.1M
Summer Student Research on the Application of Boolean AnalysisR01GM138385 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SAHOO, DEBASHIS · 2020 to 2023
$2.0M
Precision therapeutics of inflammatory bowel disease guided by Boolean logicUG3TR003355 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DAS, SOUMITA, GHOSH, PRADIPTA · 2020 to 2022
$937k
The impact of inflammation on hematopoietic stem cell specificationK01DK115661 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESPÍN PALAZÓN, RAQUEL · 2017 to 2021
$834k
Application of Boolean Networks to discover stem and progenitor cellsR00CA151673 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SAHOO, DEBASHIS · 2014 to 2016
$717k
Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
The role of macrophages during hematopoietic stem cell emergenceR21AI137575 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TRAVER, DAVID · 2019 to 2020
$420k
In vivo assessment of granulin dependent myeloid cell formationR03DK125661 · NIDDK · IOWA STATE UNIVERSITY · PI ESPÍN PALAZÓN, RAQUEL · 2020 to 2021
$230k
NCATS NIH HHS UG3 TR003355NCI NIH HHS R00 CA151673NIAID NIH HHS R01 AI155696NIAID NIH HHS R21 AI137575NIDDK NIH HHS K01 DK115661NIDDK NIH HHS R01 DK131162NIDDK NIH HHS R03 DK125661NIGMS NIH HHS R01 GM138385NIH HHS S10 OD026929
6 · The paper itself

Abstract

Granulin is a pleiotropic protein involved in inflammation, wound healing, neurodegenerative disease, and tumorigenesis. These roles in human health have prompted research efforts to use granulin to treat rheumatoid arthritis and frontotemporal dementia and to enhance wound healing. But how granulin contributes to each of these diverse biological functions remains largely unknown. Here, we have uncovered a new role for granulin during myeloid cell differentiation. We have taken advantage of the tissue-specific segregation of the zebrafish granulin paralogues to assess the functional role of granulin in hematopoiesis without perturbing other tissues. By using our zebrafish model of granulin deficiency, we revealed that during normal and emergency myelopoiesis, myeloid progenitors are unable to terminally differentiate into neutrophils and macrophages in the absence of granulin a (grna), failing to express the myeloid-specific genes cebpa, rgs2, lyz, mpx, mpeg1, mfap4, and apoeb. Functionally, macrophages fail to recruit to the wound, resulting in abnormal healing. Our CUT&RUN experiments identify Pu.1, which together with Irf8, positively regulates grna expression. In vivo imaging and RNA sequencing experiments show that grna inhibits the expression of gata1, leading to the repression of the erythroid program. Importantly, we demonstrated functional conservation between the mammalian granulin and the zebrafish ortholog grna. Our findings uncover a previously unrecognized role for granulin during myeloid cell differentiation, which opens a new field of study that can potentially have an impact on different aspects of human health and expand the therapeutic options for treating myeloid disorders such as neutropenia or myeloid leukemia.

Indexed as

Neurodegenerative DiseasesZebrafishAnimalsCarrier ProteinsExtracellular Matrix ProteinsGlycoproteinsGranulinsHematopoiesisHumansZebrafish ProteinsCarrier ProteinsExtracellular Matrix ProteinsGlycoproteinsGranulinsMFAP4 protein, humanZebrafish Proteins

Identifiers

PMID33560393
PMCPMC7876888
OpenAlexW3126730058

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.