Evidence map›Paper›PMID 33559759›Full record

ArticleApplied biochemistry and biotechnology2021

Structural Characterization of the Hidden Peptide SHPRH-146aa Encoded by Non-Coding circ-SHPRH to Act as Tumor Suppressor.

Aniruddha Biswas, Nilkanta Chowdhury, Angshuman Bagchi

Abstract read
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In one paragraph

Article in Applied biochemistry and biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
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  5. Review
  6. Unveiling a Ghost Proteome in the Glioblastoma Non-Coding RNAs.Frontiers in cell and developmental biology · 2021
    Review
  7. The Emerging Role of Circ-SHPRH in Cancer.OncoTargets and therapy · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Aniruddha Biswas *Department of Information Technology, JIS College of Engineering, Kalyani, West Bengal, India.
Nilkanta Chowdhury *Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India.
Angshuman Bagchi *Department of Biochemistry and Biophysics, University of Kalyani, Kalyani, West Bengal, India. angshu@klyuniv.ac.in.ORCID http://orcid.org/0000-0003-4611-4663
University of Kalyani · IN

Funding

Department of Biotechnology , Ministry of Science and Technology BT/BI/25/001/2006
6 · The paper itself

Abstract

Circular RNAs belong to the class of non-coding RNA molecules, though surprisingly some of them have protein-coding potentials. However, the circular RNA circ-SHPRH is known to code for an unusual protein known as SHPRH-146aa. However, the molecular level details of the protein are not yet identified. It was proposed that the protein has its role in glioblastoma. Therefore, in this work, an attempt was made to decipher the various structural features of SHPRH-146aa. The binding interactions of the protein SHPRH-146aa with its partner protein DTL were also analyzed. The main aim of the work was to decipher the characteristics features of this unusual protein and the region on SHPRH-146aa that would form different types of non-covalent binding interactions both among itself as well as with its binding partner. In this work, we tried to elucidate the various structural and physico-chemical features of the protein as well as its mode of interactions with its binding partner. The study would therefore pave the pathway to design future wet lab experiments to delineate the appropriate structural features of the protein as well as its association with glioblastoma and neuro-degenerative diseases.

Indexed as

DNA HelicasesHumansPeptidesProtein Structure, SecondaryRNA, CircularTumor Suppressor ProteinsUbiquitin-Protein LigasesDNA HelicasesPeptidesRNA, CircularSHPRH protein, humanTumor Suppressor ProteinsUbiquitin-Protein LigasesCircular RNAGlioblastomaNeurodegenerative diseaseSHPRH-146aaUnusual featuresUnusual Peptide

Identifiers

PMID33559759
OpenAlexW3126573796

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.