Evidence map›Paper›PMID 33559747›Full record

ArticleArchives of virology2021

Diversity of limestone bacteriophages infecting Dickeya solani isolated in the Czech Republic.

Karel Petrzik, Josef Vacek, Sára Brázdová, Rudolf Ševčík, Igor Koloniuk

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. International journal of molecular sciences · 2021
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Karel PetrzikDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Czech Academy of Sciences, Branišovská 31, České Budějovice, Czech Republic. petrzik@umbr.cas.cz.ORCID http://orcid.org/0000-0001-9668-1223
Josef VacekPRI Havlíčkův Brod, Dobrovského 2366, 580 01, Havlíčkův Brod, Czech Republic.
Sára BrázdováDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Czech Academy of Sciences, Branišovská 31, České Budějovice, Czech Republic.
Rudolf ŠevčíkVŠCHT, Technická 1905/5, Praha 6-Dejvice, 160 00, Prague, Czech Republic.
Igor KoloniukDepartment of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Czech Academy of Sciences, Branišovská 31, České Budějovice, Czech Republic.
Czech Academy of Sciences · CZHavlíčkův Brod Hospital · CZUniversity of Chemistry and Technology, Prague · CZ

Funding

Akademie Věd České Republiky RVO60077344Ministry of Agriculture of the Czech Republic QK1910028
6 · The paper itself

Abstract

Seven novel tailed lytic viruses (Ds3CZ, Ds5CZ, Ds9CZ, Ds16CZ, Ds20CZ, Ds23CZ, Ds25CZ) infecting the bacterium Dickeya solani were isolated in the Czech Republic. Genomes of these viruses are dsDNA, 149,364 to 155,285 bp in length, and the genome arrangement is very similar to that of the type virus Dickeya virus LIMEstone 1. All but the Ds25CZ virus should be regarded as strains of a single species. Most of the sequence differences are due to the presence or absence of homing endonuclease (HE) genes, with 23 HEs found in Ds3CZ, Ds5CZ, and Ds20CZ, 22 in Ds9CZ, 19 in Ds16CZ, 18 in Ds25CZ, and 15 in Ds23CZ.

Indexed as

CaudoviralesCzech RepublicDickeyaDNA, ViralEndonucleasesGenetic VariationGenome, ViralPhylogenyPlant DiseasesSolanum tuberosumViral ProteinsDNA, ViralEndonucleasesViral Proteins

Identifiers

PMID33559747
OpenAlexW3128196695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.