Evidence map›Paper›PMID 33559015›Full record

ArticleFish physiology and biochemistry2021

Insights into early ontogenesis: characterization of stress and development key genes of pikeperch (Sander lucioperca) in vivo and in vitro.

Nadine Schäfer, Yagmur Kaya, Henrike Rebl, Marcus Stüeken, Alexander Rebl, Julien A Nguinkal, George P Franz, Ronald M Brunner, Tom Goldammer, Bianka Grunow and 1 more

Abstract read
In one paragraph

Article in Fish physiology and biochemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. The Pattern of Gene Expression (Animals : an open access journal from MDPI · 2024
    Article
  4. Article
  5. Nursing of Pike-Perch (Animals : an open access journal from MDPI · 2023
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Nadine SchäferInstitute of Genome Biology, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany.ORCID https://orcid.org/0000-0002-9875-2897
Yagmur KayaInstitute of Muscle Biology and Growth, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany.
Henrike ReblDepartment of Cell Biology, Rostock University Medical Center, 18059, Rostock, Germany.ORCID https://orcid.org/0000-0001-6000-1724
Marcus StüekenInstitute of Fisheries, Department of Aquaculture, Mecklenburg-Vorpommern Research Centre for Agriculture and Fisheries, 17194, Hohen Wangelin, Germany.
Alexander ReblInstitute of Genome Biology, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany.ORCID https://orcid.org/0000-0002-2918-7433
Julien A NguinkalInstitute of Genome Biology, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany.ORCID https://orcid.org/0000-0002-1303-4520
George P FranzInstitute of Muscle Biology and Growth, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany.
Ronald M BrunnerInstitute of Genome Biology, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany.
Tom GoldammerInstitute of Genome Biology, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany.ORCID https://orcid.org/0000-0003-1215-5504
Bianka GrunowInstitute of Muscle Biology and Growth, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany. grunow@fbn-dummerstorf.de.ORCID https://orcid.org/0000-0001-8503-2754
Marieke VerleihInstitute of Genome Biology, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany. verleih@fbn-dummerstorf.de.ORCID http://orcid.org/0000-0002-5141-5818

Funding

European Maritime and Fisheries Fund MV-II.1-RM-001
6 · The paper itself

Abstract

There are still numerous difficulties in the successful farming of pikeperch in the anthropogenic environment of various aquaculture systems, especially during early developmental steps in the hatchery. To investigate the physiological processes involved on the molecular level, we determined the basal expression patterns of 21 genes involved in stress and immune responses and early ontogenesis of pikeperch between 0 and 175 days post hatch (dph). Their transcription patterns most likely reflect the challenges of growth and feed conversion. The gene coding for apolipoprotein A (APOE) was strongly expressed at 0 dph, indicating its importance for yolk sac utilization. Genes encoding bone morphogenetic proteins 4 and 7 (BMP4, BMP7), creatine kinase M (CKM), and SRY-box transcription factor 9 (SOX9) were highly abundant during the peak phases of morphological changes and acclimatization processes at 4-18 dph. The high expression of genes coding for peroxisome proliferator-activated receptors alpha and delta (PPARA, PPARD) at 121 and 175 dph, respectively, suggests their importance during this strong growth phase of juvenile stages. As an alternative experimental model to replace further in vivo investigations of ontogenetically important processes, we initiated the first approach towards a long-lasting primary cell culture from whole pikeperch embryos. The present study provides a set of possible biomarkers to support the monitoring of pikeperch farming and provides a first basis for the establishment of a suitable cell model of this emerging aquaculture species.

Indexed as

Stress, PhysiologicalAnimalsCell Culture TechniquesCells, CulturedEmbryonic DevelopmentEmbryo, NonmammalianFish ProteinsGene Expression Regulation, DevelopmentalPerciformesTranscriptomeFish ProteinsAnimal welfareAquacultureEarly ontogenesisFish cell linePikeperchStress response

Identifiers

PMID33559015
PMCPMC8026417

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.