Evidence map›Paper›PMID 33558692›Full record

ArticleGene therapy2021

Highly efficient neuronal gene knockout in vivo by CRISPR-Cas9 via neonatal intracerebroventricular injection of AAV in mice.

Sam Hana, Michael Peterson, Helen McLaughlin, Eric Marshall, Attila J Fabian, Olivia McKissick, Kathryn Koszka, Galina Marsh, Michael Craft, Shanqin Xu and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Gene therapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. International journal of biological sciences · 2026
    Review
  3. Article
  4. Article
  5. A versatile immunomodulated nanoCRISPR converter augments the susceptibility and visibility of tumors to the immune system.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Recent Advances in In Vivo Somatic Cell Gene Modification in Newborn Pups.International journal of molecular sciences · 2023
    Review
  11. Review
  12. Article
  13. Article
  14. Inhibition of LAR attenuates neuroinflammation through RhoA/IRS-1/Akt signaling pathway after intracerebral hemorrhage in mice.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2023
    Article
  15. Genetic modulation of thePNAS nexus · 2023
    Article
  16. Review
  17. CRISPR/Cas9 for hepatitis B virus infection treatment.Immunity, inflammation and disease · 2023
    Review
  18. Article
  19. Review
  20. Revisiting the outcome of adult wild-typeBrain communications · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Sam HanaBiogen Inc., Cambridge, MA, USA.
Michael PetersonBiogen Inc., Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-0337-6049
Helen McLaughlinBiogen Inc., Cambridge, MA, USA.
Eric MarshallBiogen Inc., Cambridge, MA, USA.
Attila J FabianBiogen Inc., Cambridge, MA, USA.
Olivia McKissickBiogen Inc., Cambridge, MA, USA.
Kathryn KoszkaBiogen Inc., Cambridge, MA, USA.
Galina MarshBiogen Inc., Cambridge, MA, USA.
Michael CraftBiogen Inc., Cambridge, MA, USA.
Shanqin XuBiogen Inc., Cambridge, MA, USA.
Alexander SoretsBiogen Inc., Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-9406-5611
Tess TorregrosaBiogen Inc., Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-9870-0993
Chao SunBiogen Inc., Cambridge, MA, USA.
Chris E HendersonBiogen Inc., Cambridge, MA, USA.
Shih-Ching LoBiogen Inc., Cambridge, MA, USA. joyce.lo@biogen.com.ORCID http://orcid.org/0000-0002-5187-0730
Biogen (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CRISPR-Cas systems have emerged as a powerful tool to generate genetic models for studying normal and diseased central nervous system (CNS). Targeted gene disruption at specific loci has been demonstrated successfully in non-dividing neurons. Despite its simplicity, high specificity and low cost, the efficiency of CRISPR-mediated knockout in vivo can be substantially impacted by many parameters. Here, we used CRISPR-Cas9 to disrupt the neuronal-specific gene, NeuN, and optimized key parameters to achieve effective gene knockout broadly in the CNS in postnatal mice. Three cell lines and two primary neuron cultures were used to validate the disruption of NeuN by single-guide RNAs (sgRNA) harboring distinct spacers and scaffold sequences. This triage identified an optimal sgRNA design with the highest NeuN disruption in in vitro and in vivo systems. To enhance CRISPR efficiency, AAV-PHP.B, a vector with superior neuronal transduction, was used to deliver this sgRNA in Cas9 mice via neonatal intracerebroventricular (ICV) injection. This approach resulted in 99.4% biallelic indels rate in the transduced cells, leading to greater than 70% reduction of total NeuN proteins in the cortex, hippocampus and spinal cord. This work contributes to the optimization of CRISPR-mediated knockout and will be beneficial for fundamental and preclinical research.

Indexed as

CRISPR-Cas SystemsRNA, Guide, CRISPR-Cas SystemsAnimalsCentral Nervous SystemGene EditingGene Knockout TechniquesMiceNeuronsRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID33558692
PMCPMC8599009
OpenAlexW3126930662

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.