Evidence map›Paper›PMID 33558687›Full record

ArticleThe ISME journal2021

The occurrence and ecology of microbial chain elongation of carboxylates in soils.

Sayalee Joshi, Aide Robles, Samuel Aguiar, Anca G Delgado

Abstract read
In one paragraph

Article in The ISME journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Article
  3. Evaluation of lab-defined syngas and acetate as substrates for HApplied microbiology and biotechnology · 2025
    Article
  4. Article
  5. Enhancing Gas Fermentation Efficiency via Bioaugmentation withBioengineering (Basel, Switzerland) · 2025
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  17. Butanol as a major product during ethanol and acetate chain elongation.Frontiers in bioengineering and biotechnology · 2023
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sayalee Joshi *School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ, USA.ORCID http://orcid.org/0000-0002-7086-0490
Aide Robles *School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ, USA.ORCID http://orcid.org/0000-0003-0450-6909
Samuel AguiarBiodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ, USA.ORCID http://orcid.org/0000-0002-2803-2106
Anca G DelgadoSchool of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ, USA. anca.delgado@asu.edu.ORCID http://orcid.org/0000-0002-9354-0246

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chain elongation is a growth-dependent anaerobic metabolism that combines acetate and ethanol into butyrate, hexanoate, and octanoate. While the model microorganism for chain elongation, Clostridium kluyveri, was isolated from a saturated soil sample in the 1940s, chain elongation has remained unexplored in soil environments. During soil fermentative events, simple carboxylates and alcohols can transiently accumulate up to low mM concentrations, suggesting in situ possibility of microbial chain elongation. Here, we examined the occurrence and microbial ecology of chain elongation in four soil types in microcosms and enrichments amended with chain elongation substrates. All soils showed evidence of chain elongation activity with several days of incubation at high (100 mM) and environmentally relevant (2.5 mM) concentrations of acetate and ethanol. Three soils showed substantial activity in soil microcosms with high substrate concentrations, converting 58% or more of the added carbon as acetate and ethanol to butyrate, butanol, and hexanoate. Semi-batch enrichment yielded hexanoate and octanoate as the most elongated products and microbial communities predominated by C. kluyveri and other Firmicutes genera not known to undergo chain elongation. Collectively, these results strongly suggest a niche for chain elongation in anaerobic soils that should not be overlooked in soil microbial ecology studies.

Indexed as

Clostridium kluyveriSoilAcetatesAnaerobiosisFermentationSoil MicrobiologyAcetatesSoil

Identifiers

PMID33558687
PMCPMC8245554

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.