ArticleMicrobial genomics2021
Phylogenomics of
Abstract readMulticenter Study
In one paragraph
Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 119 papers.
0numbers the graph read from it
0cells of the map it votes in
119citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
119 citing papers in PubMed.
- Phenotypic and genotypic features of the Mycobacterium tuberculosis lineage 1 subgroup in central Vietnam.Scientific reports · 2021Trial
- Article
- Migration and tuberculosis transmission in Hamburg, Germany: insights from 25 years of molecular epidemiology.Genome medicine · 2026Article
- Host-strain compatibility shapes host transcriptional responses in macrophageMicrobial genomics · 2026Article
- Host and pathogen factors modulate tuberculosis clinical severity independent of molecular bacterial burden: insights from a multicenter Ghanaian cohort.IJID regions · 2026Article
- Article
- Hybrid sequencing reveals incompleteness of the H37Rv reference genome and highlights lineage-specific genomic divergence inMicrobial genomics · 2026Article
- Whole-genome sequencing suggests recent transmission of rifampicin-resistant tuberculosis in Botswana.BMC infectious diseases · 2026Article
- Dormancy regulon reduction was pivotal to the evolution of Mycobacterium tuberculosis.Nature communications · 2026Article
- The lipid language of tuberculosis:mBio · 2026Review
- Genome-wide analyses of Mycobacterium tuberculosis complex isolates reveal insights into circulating lineages and drug resistance mutations in The Gambia.Scientific reports · 2026Article
- Population structure and spatial distribution ofFrontiers in microbiology · 2026Article
- Host- and pathogen-related determinants of pulmonaryEuropean respiratory review : an official journal of the European Respiratory Society · 2026Review
- Phylodynamic analysis reveals disparate transmission dynamics of Mycobacterium tuberculosis complex lineages in Botswana.Scientific reports · 2025Article
- Cobamide metabolism, regulation, and adaptation inJournal of bacteriology · 2025Review
- Exploring transmission dynamics in epidemiologically linked pulmonary tuberculosis cases and household contacts: a WGS-based investigation.BMC genomics · 2025Article
- Canonical fact versus hypothesis testing to decipher transmission of non-tuberculous and tuberculous mycobacteria: a comparative review.Clinical microbiology reviews · 2025Review
- Cross-continental transmission and host adaptation ofiMetaOmics · 2025Article
- Genomic characterization of XDR Mycobacterium tuberculosis isolates in Argentina (2006-2015).BMC infectious diseases · 2025Article
- Mycobacterium tuberculosis complex Lineage 1: A neglected cause of tuberculosis.PLoS neglected tropical diseases · 2025Review
59 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
29 authors.
Mireia CoscollaI2SysBio, University of Valencia-FISABIO Joint Unit, Valencia, Spain.
Sebastien GagneuxSwiss Tropical and Public Health Institute, Basel, Switzerland.
Fabrizio MenardoSwiss Tropical and Public Health Institute, Basel, Switzerland.
Chloé LoiseauSwiss Tropical and Public Health Institute, Basel, Switzerland.
Paula Ruiz-RodriguezI2SysBio, University of Valencia-FISABIO Joint Unit, Valencia, Spain.
Sonia BorrellSwiss Tropical and Public Health Institute, Basel, Switzerland.
Isaac Darko OtchereNoguchi Memorial Institute for Medical Research, University of Ghana, Legon, Accra, Ghana.
Adwoa Asante-PokuNoguchi Memorial Institute for Medical Research, University of Ghana, Legon, Accra, Ghana.
Prince AsareNoguchi Memorial Institute for Medical Research, University of Ghana, Legon, Accra, Ghana.
Leonor Sánchez-BusóCentre for Genomic Pathogen Surveillance, Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Florian GehreInfectious Disease Epidemiology Department, Bernhard-Nocht-Institute for Tropical Medicine, Hamburg, Germany.
C N'Dira SanoussiMycobacteriology Unit, Institute of Tropical Medicine, Antwerp, Belgium.
Martin AntonioLondon School of Hygiene and Tropical Medicine, London, UK.
Dissou AffolabiLaboratoire de Référence des Mycobactéries, Ministry of Health, Cotonou, Bénin.
Janet FyfeMycobacterium Reference Laboratory, Victoria Infectious Diseases Reference Laboratory, Peter Doherty Institute, Melbourne, Victoria, Australia.
Patrick BeckertMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Stefan NiemannMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Abraham S AlabiCentre de Recherches Médicales en Lambaréné (Cermel), Lambaréné, Gabon.
Martin P GrobuschCentre de Recherches Médicales en Lambaréné (Cermel), Lambaréné, Gabon.
Robin KobbeFirst Department of Medicine, Division of Infectious Diseases, University Medical Center Hamburg-Eppendorf, Germany.
Julian ParkhillDepartment of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, UK.
Christian BeiselDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.
Lukas FennerInstitute of Social and Preventive Medicine, University of Bern, Bern, Switzerland.
Erik C BöttgerInstitute of Medical Microbiology, University of Zürich, Zürich, Switzerland.
Conor J MeehanSchool of Chemistry and Biosciences, University of Bradford, Bradford, UK.
Simon R HarrisMicrobiotica Limited, Bioinnovation Centre, Wellcome Genome Campus, Cambridge, CB10 1DR, UK.
Bouke C de JongMycobacteriology Unit, Institute of Tropical Medicine, Antwerp, Belgium.
Dorothy Yeboah-ManuNoguchi Memorial Institute for Medical Research, University of Ghana, Legon, Accra, Ghana.
Daniela BritesSwiss Tropical and Public Health Institute, Basel, Switzerland.
Funding
Wellcome TrustWellcome Trust 097134/Z/11/Z
Abstract
Human tuberculosis (TB) is caused by members of the
Indexed as
Drug Resistance, BacterialAfrica, EasternAfrica, WesternEvolution, MolecularGenome, BacterialHigh-Throughput Nucleotide SequencingHumansMycobacterium tuberculosisPhylogenyPhylogeographyTuberculosisWhole Genome SequencingdiversityevolutiongenomemycobacteriaMycobacterium africanumMycobacterium tuberculosis
Identifiers
What OpenQuestion holds
Textmetadata
LicenceCC BY
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.