Evidence map›Paper›PMID 33554858›Full record

ArticleeLife2021

A pentameric protein ring with novel architecture is required for herpesviral packaging.

Allison L Didychuk, Stephanie N Gates, Matthew R Gardner, Lisa M Strong, Andreas Martin, Britt A Glaunsinger

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Viral Genomic DNA Packaging Machinery.Sub-cellular biochemistry · 2024
    Review
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Allison L DidychukDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, United States.ORCID 0000-0001-7277-5233
Stephanie N GatesDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.ORCID 0000-0002-4312-2900
Matthew R GardnerDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, United States.ORCID 0000-0003-1334-5879
Lisa M StrongDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.ORCID 0000-0002-4293-8131
Andreas MartinDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.ORCID 0000-0003-0923-3284
Britt A GlaunsingerDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, United States.ORCID 0000-0003-0479-9377
QB3 · USUniversity of California, Berkeley · US

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI PAUL David ADAMS, Gregory L Hura · 2017 to 2026
$28.6M
Regulation of Gammaherpesviral Late Gene ExpressionR01AI122528 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI Britt A Glaunsinger · 2016 to 2026
$4.2M
ATP-Dependent Protein Unfolding and Translocation by the Eukaryotic ProteasomeR01GM094497 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MARTIN, ANDREAS · 2011 to 2024
$3.7M
Howard Hughes Medical InstituteNIAID NIH HHS R01 AI122528NIGMS NIH HHS P30 GM124169NIGMS NIH HHS R01 GM094497
6 · The paper itself

Abstract

Genome packaging in large double-stranded DNA viruses requires a powerful molecular motor to force the viral genome into nascent capsids, which involves essential accessory factors that are poorly understood. Here, we present structures of two such accessory factors from the oncogenic herpesviruses Kaposi's sarcoma-associated herpesvirus (KSHV; ORF68) and Epstein-Barr virus (EBV; BFLF1). These homologous proteins form highly similar homopentameric rings with a positively charged central channel that binds double-stranded DNA. Mutation of individual positively charged residues within but not outside the channel ablates DNA binding, and in the context of KSHV infection, these mutants fail to package the viral genome or produce progeny virions. Thus, we propose a model in which ORF68 facilitates the transfer of newly replicated viral genomes to the packaging motor.

Indexed as

Epstein-Barr Virus InfectionsGenome, ViralHEK293 CellsHerpesviridae InfectionsHerpesvirus 4, HumanHerpesvirus 8, HumanHumansViral Genome PackagingViral ProteinsVirus ReplicationViral ProteinsEBVEpstein-Barr virusherpesvirusinfectious diseaseKaposi's sarcoma-associated herpesvirusKSHVmicrobiologymolecular biophysicspackagingstructural biology

Identifiers

PMID33554858
PMCPMC7889075
OpenAlexW3126747106

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.