ArticlePeerJ2021
Analysis of codon usage patterns of the chloroplast genome in
Article in PeerJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
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Who cites it
31 citing papers in PubMed, 44 citations in OpenAlex.
- Comprehensive analysis of synonymous codon usage bias and evolutionary dynamics in the chloroplast genomes of eight Coptis species.Functional & integrative genomics · 2026Article
- Assembly of theGenes · 2026Article
- Analysis and comparison of chloroplast genome codon usage patterns in five accessions of Toxicodendron vernicifluum.BMC genomics · 2026Article
- Comprehensive analysis of chloroplast genome evolution in Poaceae: codon usage patterns, selection pressures, and phylogenomic relationships.BMC genomics · 2026Article
- Comparative genomics, phylogenomic reconstruction and divergence time analysis of 32Frontiers in plant science · 2026Article
- Chloroplast genome comparison of Valeriana species with sequence variation, selective pressure, and divergence analysis.PloS one · 2026Article
- RNA editing signatures and codon adaptation reveal potential translational compatibility between Hendra virus and its natural host Pteropus Alecto.Archives of microbiology · 2025Article
- Codon Usage Bias of the Polyphenol Oxidase Genes inPlants (Basel, Switzerland) · 2025Article
- Analysis of Codon Usage Patterns in a Rare Palmitoleic Acid Production Oleaginous Yeast, Scheffersomyces segobiensis.Current microbiology · 2025Article
- The population chloroplast genomes of Populus reveal the phylogenetic relationship between three new taxa of sect. Leucoides and their parents.BMC genomics · 2025Article
- Article
- Complete chloroplast genomes of three Polygala species and indel marker development for identification of authentic polygalae radix (Polygala tenuifolia).Genes & genomics · 2025Article
- The organelle genomes of the endangered seagrassFrontiers in plant science · 2025Article
- Article
- The complete chloroplast genome of Mussaenda pubescens and phylogenetic analysis.Scientific reports · 2024Article
- The complete Chloroplast genome of Stachys geobombycis and comparative analysis with related Stachys species.Scientific reports · 2024Article
- Article
- Assembly, annotation and analysis of the chloroplast genome of the Algarrobo tree Neltuma pallida (subfamily: Caesalpinioideae).BMC plant biology · 2023Article
- Article
- Article
Corrections and comments
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Authors and funding
9 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundCodon usage bias analysis is a suitable strategy for identifying the principal evolutionary driving forces in different organisms.
methodsSynonymous codon usage (SCU) and related indices of 51 coding sequences from the
resultsThe SCU bias of DISCUSSIONS: Our results provide a theoretical foundation for elucidating the genetic architecture and mechanisms of
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.