Evidence map›Paper›PMID 33550574›Full record

ArticleMolecular biology reports2021

Distribution of genes encoding virulence factors of Shigella strains isolated from children with diarrhea in southwest Iran.

Nabi Jomehzadeh, Khadijah Ahmadi, Hazhir Javaherizadeh, Maryam Afzali

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Article in Molecular biology reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Nabi JomehzadehDepartment of Microbiology, Abadan Faculty of Medical Sciences, Abadan, Iran.
Khadijah AhmadiDepartment of Microbiology, Abadan Faculty of Medical Sciences, Abadan, Iran.
Hazhir JavaherizadehAlimentary Tract Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran.
Maryam AfzaliDepartment of Microbiology, Abadan Faculty of Medical Sciences, Abadan, Iran. m.afzali97@yahoo.com.ORCID http://orcid.org/0000-0002-3618-6295
Ahvaz Jundishapur University of Medical Sciences · IRUniversity of Ibadan · NG

Funding

Abadan faculty of medical sciences, Abadan, Iran 98U-603
6 · The paper itself

Abstract

This study aimed to investigate the distribution of virulence factor genes in Shigella strains isolated from children with diarrhea in the southwest, Iran. In this cross-sectional study, 1530 diarrheal stool specimens were collected from children aged under 15 years. The Shigella strains were identified by biochemical methods and polymerase chain reaction (PCR). Subsequently, all Shigella isolates were evaluated by PCR for the presence of nine virulence genes ipaH (responsible for dissemination from cell to cell), ial (responsible for epithelial cell penetration), sat (displays cytopathic activity in several intestinal cell lines), sigA (toxic to epithelial cells), pic (associated with colonization), pet (cytotoxic for epithelial cells), sepA (contribute to intestinal inflammation and colonization), virF and invE (regulatory proteins). A total of 91 isolates including 47 S. flexneri, 36 S. sonnei, and 8 S. boydii were identified. All isolates were positive for the ipaH gene. The other genes include ial, virF, invE, sigA, sat, sepA, pic and pet found in 84.6%, 72.5%, 68.1%, 62.6%, 51.6%, 39.5%, 37.3% and 28.5% of the isolates, respectively. The results showed a high distribution of virulence genes among Shigella strains in our region. It seems that for different Shigella spp. different virulence factors contribute to pathogenesis. The current study provided insights into some baseline information about the distribution of some virulence genes of Shigella isolates in Southwest Iran.

Indexed as

AdolescentAgedAntigens, BacterialBacterial ProteinsChildChild, PreschoolDiarrheaFecesFemaleHumansInfantIranShigellaVirulence FactorsAntigens, BacterialBacterial ProteinsipaH protein, Shigella flexneriSepA protein, ShigellaVirulence FactorsDiarrheaPolymerase chain reactionShigellaVirulence factor

Identifiers

PMID33550574
OpenAlexW3128924911

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.