Evidence map›Paper›PMID 33550456›Full record

ArticlePlant molecular biology2021

Kleisin NSE4 of the SMC5/6 complex is necessary for DNA double strand break repair, but not for recovery from DNA damage in Physcomitrella (Physcomitrium patens).

Marcela Holá, Radka Vágnerová, Karel J Angelis

Abstract read
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In one paragraph

Article in Plant molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. The Phenotype ofGenes · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Molecular biology of mosses.Plant molecular biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Marcela HoláInstitute of Experimental Botany, The Czech Academy of Sciences, Na Karlovce 1, 16000, Prague, Czech Republic.ORCID http://orcid.org/0000-0001-9242-2208
Radka VágnerováInstitute of Experimental Botany, The Czech Academy of Sciences, Na Karlovce 1, 16000, Prague, Czech Republic.ORCID http://orcid.org/0000-0003-4957-7663
Karel J AngelisInstitute of Experimental Botany, The Czech Academy of Sciences, Na Karlovce 1, 16000, Prague, Czech Republic. karel.angelis@gmail.com.ORCID http://orcid.org/0000-0003-4040-2007
Czech Academy of Sciences, Institute of Experimental Botany · CZ

Funding

Grantová Agentura České Republiky 20-05095SMinisterstvo Školství, Mládeže a Tělovýchovy LTC17047
6 · The paper itself

Abstract

key messageKleisin NSE4 and circular form of SMC5/6 is indispensable for DSB repair and necessary for gene targeting but is not enough for recovery of cells from DNA damage in Physcomitrella. Structural maintenance of chromosomes (SMC) complexes are involved in cohesion, condensation and maintenance of genome stability. Based on the sensitivity of mutants to genotoxic stress the SMC5/6 complex is thought to play a prominent role in DNA stabilization during repair by tethering DNA at the site of lesion by a heteroduplex of SMC5 and SMC6 encircled with non-SMC components NSE1, NSE3 and kleisin NSE4. In this study, we tested how formation of the SMC5/6 circular structure affects mutant sensitivity to DNA damage, kinetics of DSB repair and gene targeting. In the moss Physcomitrella (Physcomitrium patens), SMC6 and NSE4 are essential single copy genes and this is why we used blocking of transcription to reveal their mutated phenotype. Even slight reduction of transcript levels by dCas9 binding was enough to obtain stable lines with severe DSB repair defects and specific bleomycin sensitivity. We show that survival after bleomycin or MMS treatment fully depends on active SMC6, whereas attenuation of NSE4 has little or negligible effect. We conclude that circularization of SMC5/6 provided by the kleisin NSE4 is indispensable for the DSB repair, nevertheless there are other functions associated with the SMC5/6 complex, which are critical to survive DNA damage.

Indexed as

DNA Breaks, Double-StrandedDNA DamageDNA RepairAmino Acid SequenceBryopsidaCell Cycle ProteinsDNA, PlantGene Expression Regulation, PlantGenotypeMultiprotein ComplexesMutationPhylogenyPlant ProteinsReverse Transcriptase Polymerase Chain ReactionSequence Homology, Amino AcidCell Cycle ProteinsDNA, PlantMultiprotein ComplexesPlant ProteinsComet assaydCas9DNA repairGene targetingNSE4 kleisinPhyscomitrellaPhyscomitrium patensSMC5/6 complex

Identifiers

PMID33550456
OpenAlexW3128061272

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.