Evidence map›Paper›PMID 33546902›Full record

ArticleHuman immunology2021

Predictive immunogenetic markers in COVID-19.

Mauro de Meira Leite, Faviel F Gonzalez-Galarza, Bruno Conde Costa da Silva, Derek Middleton, Eduardo José Melo Dos Santos

Open access · greenAbstract read
In one paragraph

Article in Human immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
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  6. Association of theViruses · 2024
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  7. Narrative Review Explaining the Role ofInfectious disease reports · 2024
    Review
  8. The molecular mechanisms of CD8Frontiers in immunology · 2024
    Review
  9. Article
  10. Review
  11. Article
  12. COVID-19 Molecular Pathophysiology: Acetylation of Repurposing Drugs.International journal of molecular sciences · 2022
    Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Association of KIR gene polymorphisms with COVID-19 disease.Clinical immunology (Orlando, Fla.) · 2022
    Article
  19. Article
  20. Pathogenesis and Treatment of Cytokine Storm Induced by Infectious Diseases.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Mauro de Meira LeiteGenetics of Complex Diseases Laboratory, Federal University of Pará, Belém, Brazil; Programa de Pós-Graduação em Biologia de Agentes Infecciosos e Parasitários, Belém, Brazil. Electronic address: mauroleite@gmail.com.
Faviel F Gonzalez-GalarzaInstitute of Integrative Biology, University of Liverpool, Liverpool, UK; Center for Biomedical Research, Faculty of Medicine, Autonomous University of Coahuila, Torreon, Mexico.
Bruno Conde Costa da SilvaGenetics of Complex Diseases Laboratory, Federal University of Pará, Belém, Brazil; Programa de Pós-Graduação em Biologia de Agentes Infecciosos e Parasitários, Belém, Brazil.
Derek MiddletonInstitute of Integrative Biology, University of Liverpool, Liverpool, UK.
Eduardo José Melo Dos SantosGenetics of Complex Diseases Laboratory, Federal University of Pará, Belém, Brazil; Programa de Pós-Graduação em Biologia de Agentes Infecciosos e Parasitários, Belém, Brazil.
Universidade Federal do Pará · BRUniversity of Liverpool · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunorelevant genes are among the most probable modulators of coronavirus disease 2019 (COVID-19) progression and prognosis. However, in the few months of the pandemic, data generated on host genetics has been scarce. The present study retrieved data sets of HLA-B alleles, KIR genes and functional single nucleotide polymorphisms (SNPs) in cytokines related to COVID-19 cytokine storm from two publicly available databases: Allele Frequency Net Database and Ensembl, and correlated these frequency data with Case Fatality Rate (CFR) and Daily Death Rates (DDR) across countries. Correlations of eight HLA-B alleles and polymorphisms in three cytokine genes (IL6, IL10, and IL12B) were observed and were mainly associated with DDR. Additionally, HLA-B correlations suggest that differences in allele affinities to SARS-CoV-2 peptides are also associated with DDR. These results may provide rationale for future host genetic marker surveys on COVID-19.

Indexed as

COVID-19Cytokine Release SyndromeCytokinesGene FrequencyGenetic MarkersHLA-B AntigensHumansInterleukin-10Interleukin-12 Subunit p40Interleukin-6Polymorphism, Single NucleotideReceptors, KIRSARS-CoV-2CytokinesGenetic MarkersHLA-B AntigensIL10 protein, humanIL12B protein, humanIL6 protein, humanInterleukin-10Interleukin-12 Subunit p40Interleukin-6Receptors, KIRCOVID-19Cytokine polymorphismsHLA-BKIR

Identifiers

PMID33546902
PMCPMC7817393
OpenAlexW3123665305

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.