Evidence map›Paper›PMID 33545712›Full record

ArticlePloS one2021

Transcriptome survey and expression analysis reveals the adaptive mechanism of 'Yulu Xiang' Pear in response to long-term drought stress.

Sheng Yang, Mudan Bai, Guowei Hao, Xiaowei Zhang, Huangping Guo, Baochun Fu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

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  5. Exogenous melatonin ameliorates drought stress inFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sheng YangPomology Institute, Shanxi Agricultural University, Shanxi Key Laboratory of Germplasm Improvement and Utilization in Pomology, Taiyuan, Shanxi, PR China.
Mudan BaiPomology Institute, Shanxi Agricultural University, Shanxi Key Laboratory of Germplasm Improvement and Utilization in Pomology, Taiyuan, Shanxi, PR China.
Guowei HaoPomology Institute, Shanxi Agricultural University, Shanxi Key Laboratory of Germplasm Improvement and Utilization in Pomology, Taiyuan, Shanxi, PR China.
Xiaowei ZhangPomology Institute, Shanxi Agricultural University, Shanxi Key Laboratory of Germplasm Improvement and Utilization in Pomology, Taiyuan, Shanxi, PR China.
Huangping GuoPomology Institute, Shanxi Agricultural University, Shanxi Key Laboratory of Germplasm Improvement and Utilization in Pomology, Taiyuan, Shanxi, PR China.ORCID 0000-0002-5499-7446
Baochun FuPomology Institute, Shanxi Agricultural University, Shanxi Key Laboratory of Germplasm Improvement and Utilization in Pomology, Taiyuan, Shanxi, PR China.
Shanxi Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pear is one of the most important economic fruits worldwide. The productivity is often negatively affected by drought disaster, but the effects and adaptive mechanism of pear in response to drought stress has not been well understood at the gene transcription levels. Using Illumina HiSeq 2500, the transcriptome from 'Yulu Xiang' Pear leaves were sequenced and analyzed to evaluate the effects of long-term drought stress on the expression of genes in different biosynthetic pathways. Results showed that long-term drought stress weakened antioxidant systematization and impaired the synthesis of photosynthetic pigment in 'Yulu Xiang' Pear leaves. The reduced light utilization and photosynthetic productivity finally resulted in the inhibited fruit development. The transcriptome survey and expression analysis identified 2,207 differentially expressed genes (DEGs) which were summarized into the 30 main functional categories. DEGs analysis showed that the enzyme genes involved in phenylpropanoid biosynthesis under drought stress were up-regulated, and the promoted process of phenylpropanoid synthesis may be beneficial to reduce the transpiration rate and increase water use efficiency of 'Yulu Xiang' Pear leaves. Up-regulated malate dehydrogenase expression were also observed in drought stress groups, and the activated soluble sugar biosynthesis could be helpful to promote osmotic regulation and increase antioxidant capacity to enhance drought resistance of leaves. The mRNA expression of enzyme genes associated with hormones including ethylene, abscisic acid, and gibberellin were higher in drought stress groups than that in control, indicating a promoted cell proliferation under drought stress. Long-term drought stress significantly decreased photosynthetic productivity, and negatively affected development of 'Yulu Xiang' Pear. Transcriptome survey and expression analysis reveals that the inhibited photosynthesis could be closely related with drought-induced lignification and hormones synthesis, and the present dataset can provide more valuable information to analyze the function of drought stress-related genes improving plant drought tolerance.

Indexed as

DroughtsGene Expression ProfilingAdaptation, PhysiologicalPyrusStress, PhysiologicalSurveys and Questionnaires

Identifiers

PMID33545712
PMCPMC7864722
OpenAlexW3128594637

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.