Evidence map›Paper›PMID 33542438›Full record

ArticleScientific reports2021

Transcriptional response to the host cell environment of a multidrug-resistant Mycobacterium tuberculosis clonal outbreak Beijing strain reveals its pathogenic features.

Pakorn Aiewsakun, Pinidphon Prombutara, Tegar Adriansyah Putra Siregar, Thanida Laopanupong, Phongthon Kanjanasirirat, Tanawadee Khumpanied, Suparerk Borwornpinyo, Pirut Tong-Ngam, Alisa Tubsuwan, Prapaporn Srilohasin and 6 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  3. A large geno-spatial cluster of multi-drug resistant tuberculosis outbreak in a western district of Thailand.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Pakorn AiewsakunDepartment of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand.
Pinidphon PrombutaraOmics Sciences and Bioinformatics Center, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.
Tegar Adriansyah Putra SiregarDepartment of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand.
Thanida LaopanupongDepartment of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand.
Phongthon KanjanasiriratExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Bangkok, Thailand.
Tanawadee KhumpaniedExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Bangkok, Thailand.
Suparerk BorwornpinyoExcellent Center for Drug Discovery, Faculty of Science, Mahidol University, Bangkok, Thailand.
Pirut Tong-NgamInstitute of Molecular Biosciences, Mahidol University, Nakhon Pathom, Thailand.
Alisa TubsuwanInstitute of Molecular Biosciences, Mahidol University, Nakhon Pathom, Thailand.
Prapaporn SrilohasinDrug-Resistance Tuberculosis Research Fund, Siriraj Foundation, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.
Angkana ChaiprasertDrug-Resistance Tuberculosis Research Fund, Siriraj Foundation, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.
Wuthiwat RuangchaiPornchai Matangkasombut Center for Microbial Genomics, Department of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand.
Prasit PalittapongarnpimDepartment of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand.
Therdsak PrammanananNational Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Pratumthani, Thailand.
Brian C VanderVenDepartment of Microbiology and Immunology, Cornell University, Ithaca, NY, USA.
Marisa PonpuakDepartment of Microbiology, Faculty of Science, Mahidol University, Bangkok, Thailand. marisa.pon@mahidol.ac.th.
Mahidol University · THNational Science and Technology Development Agency · THSiriraj Hospital · THChulalongkorn University · THCornell University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuberculosis is a global public health problem with emergence of multidrug-resistant infections. Previous epidemiological studies of tuberculosis in Thailand have identified a clonal outbreak multidrug-resistant strain of Mycobacterium tuberculosis in the Kanchanaburi province, designated "MKR superspreader", and this particular strain later was found to also spread to other regions. In this study, we elucidated its biology through RNA-Seq analyses and identified a set of genes involved in cholesterol degradation to be up-regulated in the MKR during the macrophage cell infection, but not in the H37Rv reference strain. We also found that the bacterium up-regulated genes associated with the ESX-1 secretion system during its intracellular growth phase, while the H37Rv did not. All results were confirmed by qRT-PCR. Moreover, we showed that compounds previously shown to inhibit the mycobacterial ESX-1 secretion system and cholesterol utilisation, and FDA-approved drugs known to interfere with the host cholesterol transportation were able to decrease the intracellular survival of the MKR when compared to the untreated control, while not that of the H37Rv. Altogether, our findings suggested that such pathways are important for the MKR's intracellular growth, and potentially could be targets for the discovery of new drugs against this emerging multidrug-resistant strain of M. tuberculosis.

Indexed as

Antigens, BacterialAntitubercular AgentsBacterial ProteinsBeijingBiotransformationCholesterolClone CellsDisease OutbreaksDrug Resistance, Multiple, BacterialGene Expression ProfilingGene Expression Regulation, BacterialHost-Pathogen InteractionsHumansMacrophagesMetabolic Networks and PathwaysMycobacterium tuberculosisAntigens, BacterialAntitubercular AgentsBacterial ProteinsCholesterolESAT-6 protein, Mycobacterium tuberculosisType VII Secretion Systems

Identifiers

PMID33542438
PMCPMC7862621
OpenAlexW3129115599

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.