Evidence map›Paper›PMID 33541860›Full record

ArticleCancer discovery2021

Clinical and Biological Subtypes of B-cell Lymphoma Revealed by Microenvironmental Signatures.

Nikita Kotlov, Alexander Bagaev, Maria V Revuelta, Jude M Phillip, Maria Teresa Cacciapuoti, Zoya Antysheva, Viktor Svekolkin, Ekaterina Tikhonova, Natalia Miheecheva, Natalia Kuzkina and 11 more

Abstract read
In one paragraph

Article in Cancer discovery, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 191 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
191citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

191 citing papers in PubMed, 1 synthesis or guideline pooled it.

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131 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Nikita KotlovBostonGene Corporation, Waltham, Massachusetts.ORCID 0000-0002-6393-7357
Alexander BagaevBostonGene Corporation, Waltham, Massachusetts.ORCID 0000-0002-8680-854X
Maria V RevueltaHematology and Oncology Division, Medicine Department, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York.ORCID 0000-0002-7922-0713
Jude M PhillipHematology and Oncology Division, Medicine Department, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York.ORCID 0000-0002-2999-5254
Maria Teresa CacciapuotiPathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York.
Zoya AntyshevaBostonGene Corporation, Waltham, Massachusetts.
Viktor SvekolkinBostonGene Corporation, Waltham, Massachusetts.
Ekaterina TikhonovaBostonGene Corporation, Waltham, Massachusetts.
Natalia MiheechevaBostonGene Corporation, Waltham, Massachusetts.
Natalia KuzkinaBostonGene Corporation, Waltham, Massachusetts.
Grigorii NosBostonGene Corporation, Waltham, Massachusetts.ORCID 0000-0002-8066-7424
Fabrizio TabboPathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York.ORCID 0000-0001-8525-2992
Felix FrenkelBostonGene Corporation, Waltham, Massachusetts.ORCID 0000-0002-8958-7447
Paola GhioneHematology and Oncology Division, Medicine Department, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York.
Maria TsiperBostonGene Corporation, Waltham, Massachusetts.
Nava AlmogBostonGene Corporation, Waltham, Massachusetts.
Nathan FowlerBostonGene Corporation, Waltham, Massachusetts.
Ari M MelnickHematology and Oncology Division, Medicine Department, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York.ORCID 0000-0002-8074-2287
John P LeonardHematology and Oncology Division, Medicine Department, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York.
Giorgio InghiramiPathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York.
Leandro CerchiettiHematology and Oncology Division, Medicine Department, New York Presbyterian Hospital, Weill Cornell Medicine, New York, New York. lec2010@med.cornell.edu.ORCID 0000-0003-0608-1350

Funding

Preclinical Models and Therapeutics CoreP01CA229100 · NCI · MAYO CLINIC ARIZONA · PI SCOTT, DAVID WILLIAM · 2018 to 2022
$10.2M
Role of the stromal microenvironment in B-cell lymphoma progression and immune escapeR01CA242069 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CERCHIETTI, LEANDRO C · 2020 to 2024
$2.9M
NCI NIH HHS P01 CA229100NCI NIH HHS R01 CA242069
6 · The paper itself

Abstract

Diffuse large B-cell lymphoma (DLBCL) is a biologically and clinically heterogeneous disease. Transcriptomic and genetic characterization of DLBCL has increased the understanding of its intrinsic pathogenesis and provided potential therapeutic targets. However, the role of the microenvironment in DLBCL biology remains less understood. Here, we performed a transcriptomic analysis of the microenvironment of 4,655 DLBCLs from multiple independent cohorts and described four major lymphoma microenvironment categories that associate with distinct biological aberrations and clinical behavior. We also found evidence of genetic and epigenetic mechanisms deployed by cancer cells to evade microenvironmental constraints of lymphoma growth, supporting the rationale for implementing DNA hypomethylating agents in selected patients with DLBCL. In addition, our work uncovered new therapeutic vulnerabilities in the biochemical composition of the extracellular matrix that were exploited to decrease DLBCL proliferation in preclinical models. This novel classification provides a road map for the biological characterization and therapeutic exploitation of the DLBCL microenvironment. SIGNIFICANCE: In a translational relevant transcriptomic-based classification, we characterized the microenvironment as a critical component of the B-cell lymphoma biology and associated it with the DLBCL clinical behavior establishing a novel opportunity for targeting therapies.

Indexed as

Gene Expression ProfilingHumansLymphoma, Large B-Cell, DiffuseTumor Microenvironment

Identifiers

PMID33541860
PMCPMC8178179

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.