Evidence map›Paper›PMID 33540859›Full record

ArticleInternational journal of molecular sciences2021

Comparative Analysis Identifies Similarities between the Human and Murine Microglial Sensomes.

Erik R Abels, Lisa Nieland, Suzanne Hickman, Marike L D Broekman, Joseph El Khoury, Sybren L N Maas

Abstract readComparative StudyValidation Study
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

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  16. Specificities of Living Human Microglial Cells.Advances in neurobiology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Erik R AbelsDepartments of Neurology and Radiology, Massachusetts General Hospital, NeuroDiscovery Center, Harvard Medical School, Boston, MA 02129, USA.
Lisa NielandDepartments of Neurology and Radiology, Massachusetts General Hospital, NeuroDiscovery Center, Harvard Medical School, Boston, MA 02129, USA.ORCID 0000-0002-4396-8252
Suzanne HickmanCenter for Immunology & Inflammatory Diseases, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02129, USA.
Marike L D BroekmanDepartment of Neurosurgery, Leiden University Medical Center, 2333 ZA Leiden, The Netherlands.
Joseph El KhouryCenter for Immunology & Inflammatory Diseases, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02129, USA.ORCID 0000-0003-1498-1703
Sybren L N MaasCenter for Immunology & Inflammatory Diseases, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02129, USA.

Funding

The Neuroimmune System in Alzheimer's DiseaseRF1AG051506 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI EL-KHOURY, JOSEPH EL · 2015 to 2015
$3.8M
Role of SCARF1 in apoptotic cell clearance and prevention of autoimmunityR01AI119065 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI EL-KHOURY, JOSEPH EL · 2015 to 2019
$1.9M
NIA NIH HHS RF1 AG051506NIH HHS 1RF1 AG051506NIH HHS R01 AI119065
6 · The paper itself

Abstract

One of the essential functions of microglia is to continuously sense changes in their environment and adapt to those changes. For this purpose, they use a set of genes termed the sensome. This sensome is comprised of the most abundantly expressed receptors on the surface of microglia. In this study, we updated previously identified mouse microglial sensome by incorporating an additional published RNAseq dataset into the data-analysis pipeline. We also identified members of the human microglial sensome using two independent human microglia RNAseq data sources. Using both the mouse and human microglia sensomes, we identified a key set of genes conserved between the mouse and human microglial sensomes as well as some differences between the species. We found a key set of 57 genes to be conserved in both mouse and human microglial sensomes. We define these genes as the "microglia core sensome". We then analyzed expression of genes in this core sensome in five different datasets from two neurodegenerative disease models at various stages of the diseases and found that, overall, changes in the level of expression of microglial sensome genes are specific to the disease or condition studied. Our results highlight the relevance of data generated in mice for understanding the biology of human microglia, but also stress the importance of species-specific gene sets for the investigation of diseases involving microglia. Defining this microglial specific core sensome may help identify pathological changes in microglia in humans and mouse models of human disease.

Indexed as

AgingAnimalsCerebral CortexDatasets as TopicGene ExpressionGene OntologyHumansInflammationMiceMicrogliaNerve Tissue ProteinsNeurodegenerative DiseasesReceptors, Cell SurfaceRNA, MessengerRNA-SeqSpecies SpecificityNerve Tissue ProteinsReceptors, Cell SurfaceRNA, Messengeraginggene expressionmicrogliaRNAseqsensome

Identifiers

PMID33540859
PMCPMC7867338

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.