Evidence map›Paper›PMID 33539571›Full record

ArticleJournal of neurochemistry2021

A ketogenic diet differentially affects neuron and astrocyte transcription.

Scott J Koppel, Dong Pei, Heather M Wilkins, Ian W Weidling, Xiaowan Wang, Blaise W Menta, Judit Perez-Ortiz, Anuradha Kalani, Sharon Manley, Lesya Novikova and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of neurochemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 27 citations in OpenAlex.

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  13. Ketogenic diet for mood disorders from animal models to clinical application.Journal of neural transmission (Vienna, Austria : 1996) · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Scott J KoppelUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.ORCID 0000-0001-9001-4454
Dong PeiDepartments of Biostatistics and Data Science, University of Kansas Medical Center, Kansas City, KS, USA.
Heather M WilkinsUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.
Ian W WeidlingUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.
Xiaowan WangUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.
Blaise W MentaUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.ORCID 0000-0002-1001-2078
Judit Perez-OrtizUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.
Anuradha KalaniUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.
Sharon ManleyUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.
Lesya NovikovaUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.
Devin C KoestlerDepartments of Biostatistics and Data Science, University of Kansas Medical Center, Kansas City, KS, USA.
Russell H SwerdlowUniversity of Kansas Alzheimer's Disease Center, Kansas City, KS, USA.ORCID 0000-0003-2948-7230
University of Kansas · USUniversity of Kansas Medical Center · US

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI John A Stanford · 2012 to 2026
$63.0M
Transgenic & Gene-Targeting Shared ResourceP30CA168524 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ROY A. JENSEN · 2012 to 2026
$40.1M
University of Kansas Alzheimer's Disease Research Center (KU ADRC)P30AG072973 · NIA · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Jaime Perales Puchalt · 2021 to 2026
$25.3M
Using Integrated Omics to Identify Dysfunctional Genetic Mechanisms Influencing Schizophrenia and Sleep DisturbancesP20GM130423 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Kalyani Pyaram, Steven Allan Soper · 2019 to 2026
$21.5M
University of Kansas Alzheimer's Disease Core CentersP30AG035982 · NIA · UNIVERSITY OF KANSAS MEDICAL CENTER · PI BROOKS, WILLIAM M. · 2011 to 2020
$16.6M
Using PCORnet to Expand the DS-CONNECT Cohort Through Healthcare System Recruitment, Incorporating Electronic Health Records, and Assessing Self-DeterminationU54HD090216 · NICHD · UNIVERSITY OF KANSAS LAWRENCE · PI COLOMBO, JOHN A. · 2016 to 2020
$6.2M
Molecular Regulation of Cell Development and Differentiation Phase III COBREP30GM122731 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI VIVIAN, JAY L · 2017 to 2021
$5.6M
Novel Approaches for the Control of Microbial PathogensP30GM103326 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI LUTKENHAUS, JOSEPH F · 2012 to 2016
$5.3M
Kansas University Training Program in Neurological and Rehabilitation SciencesT32HD057850 · NICHD · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Jacob J. Sosnoff · 2009 to 2026
$3.4M
NEURAL BASES OF MOTOR DYSFUNCTION AND REHABILITATIONT32HD007523 · NICHD · UNIVERSITY OF KANSAS MEDICAL CENTER · PI NUDO, RANDOLPH J · 2000 to 2004
$620k
High Throughput Sequencing System for KUMC Genomics CoreS10OD021743 · OD · UNIVERSITY OF KANSAS MEDICAL CENTER · PI SMITH, PETER G · 2017 to 2017
$493k
The role of ketogenic diet metabolites in molecular signaling within distinct brain cell populations.F30AG058397 · NIA · UNIVERSITY OF KANSAS MEDICAL CENTER · PI KOPPEL, SCOTT JOSHUA · 2018 to 2021
$164k
NCI NIH HHS P30 CA168524NIA NIH HHS F30 AG058397NIA NIH HHS P30 AG035982NIA NIH HHS P30 AG072973NICHD NIH HHS T32 HD007523NICHD NIH HHS T32 HD057850NICHD NIH HHS U54 HD090216NIGMS NIH HHS P20 GM103418NIGMS NIH HHS P20 GM130423NIGMS NIH HHS P30 GM103326NIGMS NIH HHS P30 GM122731NIH HHS S10 OD021743
6 · The paper itself

Abstract

Ketogenic diets (KDs) alter brain metabolism. Multiple mechanisms may account for their effects, and different brain regions may variably respond. Here, we considered how a KD affects brain neuron and astrocyte transcription. We placed male C57Bl6/N mice on either a 3-month KD or chow diet, generated enriched neuron and astrocyte fractions, and used RNA-Seq to assess transcription. Neurons from KD-treated mice generally showed transcriptional pathway activation while their astrocytes showed a mix of transcriptional pathway suppression and activation. The KD especially affected pathways implicated in mitochondrial and endoplasmic reticulum function, insulin signaling, and inflammation. An unbiased analysis of KD-associated expression changes strongly implicated transcriptional pathways altered in AD, which prompted us to explore in more detail the potential molecular relevance of a KD to AD. Our results indicate a KD differently affects neurons and astrocytes, and provide unbiased evidence that KD-induced brain effects are potentially relevant to neurodegenerative diseases such as AD.

Indexed as

AnimalsAstrocytesBrainDiet, KetogenicKetone BodiesMaleMiceMice, Inbred C57BLNeuronsTranscription, GeneticKetone BodiesAlzheimer's diseaseastrocytesketogenic dietmitochondrianeuronsRNA-Seq

Identifiers

PMID33539571
PMCPMC8222170
OpenAlexW3127175401

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.