Evidence map›Paper›PMID 33539396›Full record

ArticlePloS one2021

DOCK11 and DENND2A play pivotal roles in the maintenance of hepatitis B virus in host cells.

Shinichi Hashimoto, Takayoshi Shirasaki, Taro Yamashita, Sadahiro Iwabuchi, Yutaka Suzuki, Yuzuru Takamura, Yoshiaki Ukita, Shungo Deshimaru, Toshitugu Okayama, Kazuho Ikeo and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Wnt/β-Catenin Signaling Regulates Hepatitis B Virus cccDNA Levels.International journal of molecular sciences · 2025
    Article
  3. Hepatitis B virus entry, assembly, and egress.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Back to the Roots: Noncanonical Retrograde Trafficking of the HBV Nucleocapsids.Cellular and molecular gastroenterology and hepatology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 1 country.

Shinichi HashimotoDepartment of Molecular Pathophysiology, Institute of Advanced Medicine, Wakayama Medical University, Wakayama, Japan.ORCID 0000-0002-1223-2349
Takayoshi ShirasakiDepartment of Gastroenterology, Graduate School of Medicine, Kanazawa University, Ishikawa, Japan.
Taro YamashitaDepartment of Gastroenterology, Graduate School of Medicine, Kanazawa University, Ishikawa, Japan.
Sadahiro IwabuchiDepartment of Molecular Pathophysiology, Institute of Advanced Medicine, Wakayama Medical University, Wakayama, Japan.ORCID 0000-0003-0434-3054
Yutaka SuzukiDepartment of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.
Yuzuru TakamuraDepartment of Bioscience and Biotechnology, Japan Advanced Institute of Science and Technology, Ishikawa, Japan.
Yoshiaki UkitaFaculty of Engineering, Graduate Faculty of Interdisciplinary Research, University of Yamanashi, Yamanashi, Japan.
Shungo DeshimaruDivision of Molecular Regulation of Inflammatory and Immune Diseases, Research Institute of Biomedical Sciences, Tokyo University of Science, Noda, Japan.
Toshitugu OkayamaLaboratory of DNA Data Analysis, National Institute of Genetics, Shizuoka, Japan.
Kazuho IkeoLaboratory of DNA Data Analysis, National Institute of Genetics, Shizuoka, Japan.
Kazuyuki KurokiDepartment of Gastroenterology, Graduate School of Medicine, Kanazawa University, Ishikawa, Japan.
Kazunori KawaguchiDepartment of Gastroenterology, Graduate School of Medicine, Kanazawa University, Ishikawa, Japan.ORCID 0000-0002-4927-1704
Eishiro MizukoshiDepartment of Gastroenterology, Graduate School of Medicine, Kanazawa University, Ishikawa, Japan.
Kouji MatsushimaDivision of Molecular Regulation of Inflammatory and Immune Diseases, Research Institute of Biomedical Sciences, Tokyo University of Science, Noda, Japan.
Masao HondaDepartment of Gastroenterology, Graduate School of Medicine, Kanazawa University, Ishikawa, Japan.ORCID 0000-0001-7113-3319
Shuichi KanekoDepartment of Gastroenterology, Graduate School of Medicine, Kanazawa University, Ishikawa, Japan.
Kanazawa University · JPNational Institute of Genetics · JPTokyo University of Science · JPWakayama Medical University · JPJapan Advanced Institute of Science and Technology · JPThe University of Tokyo · JPUniversity of Yamanashi · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human hepatitis B virus (HBV) infection remains a serious health problem worldwide. However, the mechanism for the maintenance of HBV in a latent state within host cells remains unclear. Here, using single-cell RNA sequencing analysis, we identified four genes linked to the maintenance of HBV in a liver cell line expressing HBV RNA at a low frequency. These genes included DOCK11 and DENND2A, which encode small GTPase regulators. In primary human hepatocytes infected with HBV, knockdown of these two genes decreased the amount of both HBV DNA and covalently closed circular DNA to below the limit of detection. Our findings reveal a role for DOCK11 and DENND2A in the maintenance of HBV.

Indexed as

Base SequenceDNA, ViralGuanine Nucleotide Exchange FactorsHepatitis BHepatitis B virusHepatocytesHep G2 CellsHost Microbial InteractionsHumansLatent InfectionLiverPrimary Cell CultureSingle-Cell AnalysisVirus ReplicationDNA, ViralGuanine Nucleotide Exchange Factors

Identifiers

PMID33539396
PMCPMC7861363
OpenAlexW3128752463

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.