Evidence map›Paper›PMID 33539346›Full record

ArticlePLoS genetics2021

The Species-Specific Acquisition and Diversification of a K1-like Family of Killer Toxins in Budding Yeasts of the Saccharomycotina.

Lance R Fredericks, Mark D Lee, Angela M Crabtree, Josephine M Boyer, Emily A Kizer, Nathan T Taggart, Cooper R Roslund, Samuel S Hunter, Courtney B Kennedy, Cody G Willmore and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. ThemBio · 2025
    Article
  8. A Comprehensive Structural and Functional Analysis ofbioRxiv : the preprint server for biology · 2025
    Article
  9. The KillerMicroorganisms · 2024
    Review
  10. Review
  11. Inhibition of diastatic yeasts byApplied and environmental microbiology · 2024
    Article
  12. Review
  13. Article
  14. The evolutionary ecology of fungal killer phenotypes.Proceedings. Biological sciences · 2023
    Review
  15. Article
  16. Review
  17. Discovery of a rapidly evolving yeast defense factor,Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Lance R FredericksDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0002-1679-2386
Mark D LeeDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.
Angela M CrabtreeDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0001-6584-8158
Josephine M BoyerDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0002-5203-2122
Emily A KizerDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0001-6126-5174
Nathan T TaggartDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0002-6529-9264
Cooper R RoslundDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0003-3615-7125
Samuel S HunteriBEST Genomics Core, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0002-9358-1777
Courtney B KennedyDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.
Cody G WillmoreDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0002-0209-1685
Nova M TebbeDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.
Jade S HarrisDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.
Sarah N BrockeDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0002-9942-0106
Paul A RowleyDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, United States of America.ORCID 0000-0002-3590-5139
University of Idaho · US

Funding

Women's health: interplay of maternal diet and key demographics on neurological health in the rural frontier and remote WestP20GM103408 · NIGMS · UNIVERSITY OF IDAHO · PI Carolyn Hovde Bohach · 2012 to 2026
$59.8M
Sequence-structure-function relationships in human visual photopigmentsP20GM104420 · NIGMS · UNIVERSITY OF IDAHO · PI VAN LEUVEN, JAMES · 2015 to 2024
$22.9M
Genomics Resources Core (GRC)P30GM103324 · NIGMS · UNIVERSITY OF IDAHO · PI SETTLES, MATTHEW · 2013 to 2017
$5.0M
NIGMS NIH HHS P20 GM103408NIGMS NIH HHS P20 GM104420NIGMS NIH HHS P30 GM103324
6 · The paper itself

Abstract

Killer toxins are extracellular antifungal proteins that are produced by a wide variety of fungi, including Saccharomyces yeasts. Although many Saccharomyces killer toxins have been previously identified, their evolutionary origins remain uncertain given that many of these genes have been mobilized by double-stranded RNA (dsRNA) viruses. A survey of yeasts from the Saccharomyces genus has identified a novel killer toxin with a unique spectrum of activity produced by Saccharomyces paradoxus. The expression of this killer toxin is associated with the presence of a dsRNA totivirus and a satellite dsRNA. Genetic sequencing of the satellite dsRNA confirmed that it encodes a killer toxin with homology to the canonical ionophoric K1 toxin from Saccharomyces cerevisiae and has been named K1-like (K1L). Genomic homologs of K1L were identified in six non-Saccharomyces yeast species of the Saccharomycotina subphylum, predominantly in subtelomeric regions of the genome. When ectopically expressed in S. cerevisiae from cloned cDNAs, both K1L and its homologs can inhibit the growth of competing yeast species, confirming the discovery of a family of biologically active K1-like killer toxins. The sporadic distribution of these genes supports their acquisition by horizontal gene transfer followed by diversification. The phylogenetic relationship between K1L and its genomic homologs suggests a common ancestry and gene flow via dsRNAs and DNAs across taxonomic divisions. This appears to enable the acquisition of a diverse arsenal of killer toxins by different yeast species for potential use in niche competition.

Indexed as

Genetic VariationAscomycotaEvolution, MolecularGene FlowGene Transfer, HorizontalKiller Factors, YeastPhylogenyRNA, Double-StrandedRNA, ViralSaccharomycesSaccharomyces cerevisiaeSaccharomycetalesSpecies SpecificityTotivirusKiller Factors, YeastRNA, Double-StrandedRNA, Viral

Identifiers

PMID33539346
PMCPMC7888664
OpenAlexW3127654433

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.