Evidence map›Paper›PMID 33537864›Full record

ArticleDaru : journal of Faculty of Pharmacy, Tehran University of Medical Sciences2021

Molecular docking of alpha-enolase to elucidate the promising candidates against Streptococcus pneumoniae infection.

Muhammad Hassan, Atif Amin Baig, Syed Awais Attique, Shafqat Abbas, Fizza Khan, Sara Zahid, Qurat Ul Ain, Muhammad Usman, Nordin Bin Simbak, Mohammad Amjad Kamal and 1 more

Open access · greenAbstract read
In one paragraph

Article in Daru : journal of Faculty of Pharmacy, Tehran University of Medical Sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Frontiers in medicine · 2026
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  6. BeyondMolecular therapy oncolytics · 2023
    Review
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 5 countries.

Muhammad HassanFaculty of Medicine, Universiti Sultan Zainal Abidin (UniSZA), Jalan Sultan Mahmud, 20400, Kuala Terengganu, Terengganu Darul Iman, Malaysia.
Atif Amin BaigFaculty of Medicine, Universiti Sultan Zainal Abidin (UniSZA), Jalan Sultan Mahmud, 20400, Kuala Terengganu, Terengganu Darul Iman, Malaysia. atifamin@unisza.edu.my.
Syed Awais AttiqueResearch Centre for Modelling and Simulation (RCMS), National University of Sciences and Technology (NUST), Islamabad, H-12, Pakistan.
Shafqat AbbasSchool of Environmental Engineering, Suzhou University of Science and Technology, Suzhou New District, 215009, China.
Fizza KhanCentre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisalabad, 38000, Pakistan.
Sara ZahidCentre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisalabad, 38000, Pakistan.
Qurat Ul AinCentre for Applied Molecular Biology (CAMB), University of the Punjab, Lahore, 53700, Pakistan.
Muhammad UsmanDepartment of Computer Science, University of Agriculture, Faisalabad, 38000, Pakistan.
Nordin Bin SimbakFaculty of Medicine, Universiti Sultan Zainal Abidin (UniSZA), Jalan Sultan Mahmud, 20400, Kuala Terengganu, Terengganu Darul Iman, Malaysia.
Mohammad Amjad KamalKing Fahd Medical Research Center, King Abdulaziz University, P.O. Box 80216, Jeddah, 21589, Saudi Arabia.
Hanani Ahmad YusofKulliyyah of Allied Health Sciences, International Islamic University Malaysia (IIUM), 25200, Kuantan, Pahang, Malaysia.
Sultan Zainal Abidin University · MYUniversity of Agriculture Faisalabad · PKInternational Islamic University Malaysia · MYKing Abdulaziz University · SANational University of Sciences and Technology · PKSuzhou University of Science and Technology · CNUniversity of the Punjab · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo predict potential inhibitors of alpha-enolase to reduce plasminogen binding of Streptococcus pneumoniae (S. pneumoniae) that may lead as an orally active drug. S. pneumoniae remains dominant in causing invasive diseases. Fibrinolytic pathway is a critical factor of S. pneumoniae to invade and progression of disease in the host body. Besides the low mass on the cell surface, alpha-enolase possesses significant plasminogen binding among all exposed proteins.

methodsIn-silico based drug designing approach was implemented for evaluating potential inhibitors against alpha-enolase based on their binding affinities, energy score and pharmacokinetics. Lipinski's rule of five (LRo5) and Egan's (Brain Or IntestinaL EstimateD) BOILED-Egg methods were executed to predict the best ligand for biological systems.

resultsMolecular docking analysis revealed, Sodium (1,5-dihydroxy-2-oxopyrrolidin-3-yl)-hydroxy-dioxidophosphanium (SF-2312) as a promising inhibitor that fabricates finest attractive charges and conventional hydrogen bonds with S. pneumoniae alpha-enolase. Moreover, the pharmacokinetics of SF-2312 predict it as a therapeutic inhibitor for clinical trials. Like SF-2312, phosphono-acetohydroxamate (PhAH) also constructed adequate interactions at the active site of alpha-enolase, but it predicted less favourable than SF-2312 based on binding affinity.

conclusionBriefly, SF-2312 and PhAH ligands could inhibit the role of alpha-enolase to restrain plasminogen binding, invasion and progression of S. pneumoniae. As per our investigation and analysis, SF-2312 is the most potent naturally existing inhibitor of S. pneumoniae alpha-enolase in current time.

Indexed as

Administration, OralHydroxamic AcidsMolecular Docking SimulationOrganophosphonatesPhosphonoacetic AcidPhosphopyruvate HydratasePneumococcal InfectionsPyrrolidinonesStreptococcus pneumoniae(1,5-dihydroxy-2-oxopyrrolidin-3-yl)phosphonic acidHydroxamic AcidsOrganophosphonatesPhosphonoacetic AcidphosphonoacetohydroxamatePhosphopyruvate HydratasePyrrolidinonesEnolase ligandsMolecular dockingNETsPhAHSF-2312

Identifiers

PMID33537864
PMCPMC8149539
OpenAlexW3127013077

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.