Evidence map›Paper›PMID 33536435›Full record

ArticleNature communications2021

Conserved strategies of RNA polymerase I hibernation and activation.

Florian B Heiss, Julia L Daiß, Philipp Becker, Christoph Engel

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Review
  7. Article
  8. RNA Polymerases I and III in development and disease.Seminars in cell & developmental biology · 2023
    Review
  9. Article
  10. Ribosome biogenesis in disease: new players and therapeutic targets.Signal transduction and targeted therapy · 2023
    Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Florian B HeissRegensburg Center for Biochemistry, University of Regensburg, Universitätsstraße 31, 93053, Regensburg, Germany.ORCID 0000-0002-3934-1131
Julia L DaißRegensburg Center for Biochemistry, University of Regensburg, Universitätsstraße 31, 93053, Regensburg, Germany.
Philipp BeckerRegensburg Center for Biochemistry, University of Regensburg, Universitätsstraße 31, 93053, Regensburg, Germany.
Christoph EngelRegensburg Center for Biochemistry, University of Regensburg, Universitätsstraße 31, 93053, Regensburg, Germany. christoph.engel@ur.de.ORCID 0000-0001-8451-3599
University of Regensburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA polymerase (Pol) I transcribes the ribosomal RNA precursor in all eukaryotes. The mechanisms 'activation by cleft contraction' and 'hibernation by dimerization' are unique to the regulation of this enzyme, but structure-function analysis is limited to baker's yeast. To understand whether regulation by such strategies is specific to this model organism or conserved among species, we solve three cryo-EM structures of Pol I from Schizosaccharomyces pombe in different functional states. Comparative analysis of structural models derived from high-resolution reconstructions shows that activation is accomplished by a conserved contraction of the active center cleft. In contrast to current beliefs, we find that dimerization of the S. pombe polymerase is also possible. This dimerization is achieved independent of the 'connector' domain but relies on two previously undescribed interfaces. Our analyses highlight the divergent nature of Pol I transcription systems from their counterparts and suggest conservation of regulatory mechanisms among organisms.

Indexed as

Transcription, GeneticAmino Acid SequenceBase SequenceCryoelectron MicroscopyModels, MolecularProtein ConformationProtein MultimerizationProtein SubunitsRNA Polymerase IRNA, RibosomalSaccharomyces cerevisiaeSchizosaccharomycesSchizosaccharomyces pombe ProteinsSequence Homology, Amino AcidProtein SubunitsRNA Polymerase IRNA, RibosomalSchizosaccharomyces pombe Proteins

Identifiers

PMID33536435
PMCPMC7859239
OpenAlexW3126359197

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.