Evidence map›Paper›PMID 33536203›Full record

ArticleScience advances2021

INFORM: INFrared-based ORganizational Measurements of tumor and its microenvironment to predict patient survival.

Saumya Tiwari, Andre Kajdacsy-Balla, Joshua Whiteley, Georgina Cheng, Stephen M Hewitt, Rohit Bhargava

Erratum issuedAbstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Metasurface-Enhanced Mid-Infrared Spectrochemical Imaging of Tissues.Advanced materials (Deerfield Beach, Fla.) · 2023
    Article
  14. Digital Histopathology by Infrared Spectroscopic Imaging.Annual review of analytical chemistry (Palo Alto, Calif.) · 2023
    Review
  15. Review
  16. Article
  17. Deepfake Histologic Images for Enhancing Digital Pathology.Laboratory investigation; a journal of technical methods and pathology · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Saumya TiwariDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.ORCID 0000-0001-5148-6539
Andre Kajdacsy-BallaDepartment of Pathology, University of Illinois at Chicago, Chicago, IL 60612, USA.ORCID 0000-0001-8699-762X
Joshua WhiteleyDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
Georgina ChengCarle Foundation Hospital, Urbana IL 61801, USA.
Stephen M HewittLaboratory of Pathology, Center for Cancer Research, National Cancer Institute, Bethesda, MD 20892, USA.ORCID 0000-0001-8283-1788
Rohit BhargavaDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA. rxb@illinois.edu.ORCID 0000-0001-7360-994X

Funding

Experimental Pathology Laboratory (EPL)ZICBC011638 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HEWITT, STEPHEN · 2015 to 2025
$16.6M
Discrete Frequency Infrared Spectroscopic Imaging for Breast HistopathologyR01EB009745 · NIBIB · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BHARGAVA, ROHIT · 2010 to 2025
$5.1M
NIBIB NIH HHS R01 EB009745
6 · The paper itself

Abstract

The structure and organization of a tumor and its microenvironment are often associated with cancer outcomes due to spatially varying molecular composition and signaling. A persistent challenge is to use this physical and chemical spatial organization to understand cancer progression. Here, we present a high-definition infrared imaging-based organizational measurement framework (INFORM) that leverages intrinsic chemical contrast of tissue to label unique components of the tumor and its microenvironment. Using objective and automated computational methods, further, we determine organization characteristics important for prediction. We show that the tumor spatial organization assessed with this framework is predictive of overall survival in colon cancer that adds to capability from clinical variables such as stage and grade, approximately doubling the risk of death in high-risk individuals. Our results open an all-digital avenue for measuring and studying the association between tumor spatial organization and disease progression.

Indexed as

Colonic NeoplasmsHumansTumor Microenvironment

Identifiers

PMID33536203
PMCPMC7857685

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.