Evidence map›Paper›PMID 33535437›Full record

ArticleInternational journal of molecular sciences2021

A Bioassay Using a Pentadecanal Derivative to Measure S1P Lyase Activity.

Kyong-Oh Shin, Maftuna Shamshiddinova, Jung-No Lee, Kwang-Sik Lee, Yong-Moon Lee

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Upregulation of sphingosine kinase 1 in response to doxorubicin generates an angiogenic response via stabilization of Snail.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Kyong-Oh ShinCollege of Pharmacy, Chungbuk National University, Cheongju, Chungbuk 28644, Korea.
Maftuna ShamshiddinovaCollege of Pharmacy, Chungbuk National University, Cheongju, Chungbuk 28644, Korea.
Jung-No LeeBio Convergence R&D Center, CoSeedBioPharm Corporation, Heungdeok-gu, Cheongju, Chungbuk 28161, Korea.
Kwang-Sik LeeFuture Science Research Center, Coreana Cosmetics Corporation, Chungnam 31041, Korea.
Yong-Moon LeeCollege of Pharmacy, Chungbuk National University, Cheongju, Chungbuk 28644, Korea.
Chungbuk National University · KRKomipharm International (South Korea) · KR

Funding

Korea Institute for Advancement of Technology (KIAT) P0002162
6 · The paper itself

Abstract

Sphingosine-1-phosphate (S1P) is a unique lipid ligand binding to S1P receptors to transduce various cell survival or proliferation signals via small G proteins. S1P lyase (S1PL) is the specific enzyme that degrades S1P to phosphoethanolamine and (2E)-hexadecenal and therefore regulates S1P levels. S1PL also degrades dihydrosphingosine-1-phosphate (Sa1P), with a higher affinity to produce hexadecanal. Here, we developed a newly designed assay using a C17-Sa1P substrate that degrades into pentadecanal and phosphoethanolamine. For higher sensitivity in pentadecanal analysis, we developed a quantitative protocol as well as a 5,5-dimethyl cyclohexanedione (5,5-dimethyl CHD) derivatization method. The derivatization conditions were optimized for the reaction time, temperature, and concentrations of the 5,5-dimethyl CHD reagent, acetic acid, and ammonium acetate. The S1PL reaction in the cell lysate after spiking 20 µM of C17-Sa1P for 20 min was linear to the total protein concentrations of 50 µg. The S1PL levels (4 pmol/mg/min) were readily detected in this HPLC with fluorescence detection (λex = 366 nm, λem = 455 nm). The S1PL-catalyzed reaction was linear over 30 min and yielded a K

Indexed as

Aldehyde-LyasesAldehydesAnimalsBiological AssayCell Line, TumorChromatographyChromatography, High Pressure LiquidCyclohexanonesEthanolaminesFluorescent DyesLigandsLimit of DetectionLinear ModelsMiceMutationProtein Binding2-hexadecenalAldehyde-LyasesAldehydescyclohexanoneCyclohexanonesdimedoneEthanolaminesFluorescent DyesLigandspentadecanalphosphorylethanolaminesphingosine 1-phosphate lyase (aldolase)5,5-dimethyl cyclohexanedionefluorescence detectionhexadecenalHPLCpentadecanalsphingosine 1-phosphate lyase

Identifiers

PMID33535437
PMCPMC7867068
OpenAlexW3126806903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.