Evidence map›Paper›PMID 33534785›Full record

ArticlePLoS genetics2021

Four families of folate-independent methionine synthases.

Morgan N Price, Adam M Deutschbauer, Adam P Arkin

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. High dietary BGut microbes · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. International journal of systematic and evolutionary microbiology · 2026
    Article
  6. Article
  7. Mechanisms and rationales of SAM homeostasis.Trends in biochemical sciences · 2025
    Review
  8. Presence of vitamin BPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Article
  9. Interactive tools for functional annotation of bacterial genomes.Database : the journal of biological databases and curation · 2024
    Article
  10. Article
  11. Flexible BProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
  14. On the Evolutionary History of the Twenty Encoded Amino Acids.Chemistry (Weinheim an der Bergstrasse, Germany) · 2022
    Review
  15. Vitamin BFundamental research · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Morgan N PriceEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Lab, Berkeley, California, United States of America.ORCID 0000-0002-4251-0362
Adam M DeutschbauerEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Lab, Berkeley, California, United States of America.ORCID 0000-0003-2728-7622
Adam P ArkinEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Lab, Berkeley, California, United States of America.ORCID 0000-0002-4999-2931
Lawrence Berkeley National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although most organisms synthesize methionine from homocysteine and methyl folates, some have "core" methionine synthases that lack folate-binding domains and use other methyl donors. In vitro, the characterized core synthases use methylcobalamin as a methyl donor, but in vivo, they probably rely on corrinoid (vitamin B12-binding) proteins. We identified four families of core methionine synthases that are distantly related to each other (under 30% pairwise amino acid identity). From the characterized enzymes, we identified the families MesA, which is found in methanogens, and MesB, which is found in anaerobic bacteria and archaea with the Wood-Ljungdahl pathway. A third uncharacterized family, MesC, is found in anaerobic archaea that have the Wood-Ljungdahl pathway and lack known forms of methionine synthase. We predict that most members of the MesB and MesC families accept methyl groups from the iron-sulfur corrinoid protein of that pathway. The fourth family, MesD, is found only in aerobic bacteria. Using transposon mutants and complementation, we show that MesD does not require 5-methyltetrahydrofolate or cobalamin. Instead, MesD requires an uncharacterized protein family (DUF1852) and oxygen for activity.

Indexed as

Multigene Family5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseArchaeal ProteinsBacterial ProteinsBiosynthetic PathwaysFolic AcidHomocysteineIron-Sulfur ProteinsMethionineModels, ChemicalMolecular StructureOxygenTetrahydrofolatesVitamin B 125-methyltetrahydrofolate5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseArchaeal ProteinsBacterial ProteinsFolic AcidHomocysteineIron-Sulfur ProteinsmecobalaminMethionineOxygenTetrahydrofolatesVitamin B 12

Identifiers

PMID33534785
PMCPMC7857596
OpenAlexW3127792757

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.