Evidence map›Paper›PMID 33534543›Full record

ArticleAnalytical chemistry2021

Detection of 14 High-Risk Human Papillomaviruses Using Digital LAMP Assays on a Self-Digitization Chip.

Jiasi Wang, Jeannette P Staheli, Andrew Wu, Jason E Kreutz, Qiongzheng Hu, Jingang Wang, Thomas Schneider, Bryant S Fujimoto, Yuling Qin, Gloria S Yen and 6 more

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. StratoLAMP: Label-free, multiplex digital loop-mediated isothermal amplification based on visual stratification of precipitate.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Portable, and ultrasensitive HR-HPV tests based on nucleic acid biosensors.Frontiers in cellular and infection microbiology · 2024
    Review
  10. Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Jiasi WangDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.ORCID 0000-0003-4619-6814
Jeannette P StaheliCenter for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, Washington 98105, United States.
Andrew WuCenter for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, Washington 98105, United States.
Jason E KreutzDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.
Qiongzheng HuDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.ORCID 0000-0003-3455-8961
Jingang WangDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.
Thomas SchneiderDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.
Bryant S FujimotoDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.
Yuling QinDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.
Gloria S YenDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.ORCID 0000-0001-7282-5974
Bob WengDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.
Kara ShibleyDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.
Halia HaynesDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.
Rachel L WinerDepartment of Epidemiology, University of Washington, Seattle, Washington 98195, United States.
Qinghua FengFIDALAB, Seattle, Washington 98199, United States.
Daniel T ChiuDepartment of Chemistry, University of Washington, Seattle, Washington 98195, United States.ORCID 0000-0003-2964-9578
University of Washington · USInfectious Disease Research Institute · US

Funding

Digital LAMP as a point of care assay for HPV detectionR01EB021150 · NIBIB · UNIVERSITY OF WASHINGTON · PI CHIU, DANIEL T · 2016 to 2019
$1.9M
NIBIB NIH HHS R01 EB021150
6 · The paper itself

Abstract

Cervical cancer is the fourth-leading cause of cancer deaths among women worldwide and most cases occur in developing countries. Detection of high-risk (HR) HPV, the etiologic agent of cervical cancer, is a primary screening method for cervical cancer. However, the current gold standard for HPV detection, real-time PCR, is expensive, time-consuming, and instrumentation-intensive. A rapid, low-cost HPV detection method is needed for cervical cancer screening in low-resource settings. We previously developed a digital loop-mediated isothermal amplification (dLAMP) assay for rapid, quantitative detection of nucleic acids without the need for thermocycling. This assay employs a microfluidic self-digitization chip to automatically digitize a sample into an array of nanoliter wells in a simple assay format. Here we evaluate the dLAMP assay and self-digitization chip for detection of the commonly tested 14 high-risk HPVs in clinical samples. The dLAMP platform provided reliable genotyping and quantitative detection of the 14 high-risk HPVs with high sensitivity, demonstrating its potential for simple, rapid, and low-cost diagnosis of HPV infection.

Indexed as

AlphapapillomavirusUterine Cervical NeoplasmsEarly Detection of CancerFemaleHumansMolecular Diagnostic TechniquesNucleic Acid Amplification Techniques

Identifiers

PMID33534543
PMCPMC8020467
OpenAlexW3128286946

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.