Evidence map›Paper›PMID 33532571›Full record

ArticleACS central science2021

Multiomics Analysis Provides Insight into the Laboratory Evolution of

Federica Agostini, Ludwig Sinn, Daniel Petras, Christian J Schipp, Vladimir Kubyshkin, Allison Ann Berger, Pieter C Dorrestein, Juri Rappsilber, Nediljko Budisa, Beate Koksch

Open access · diamondAbstract read
In one paragraph

Article in ACS central science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Advances in adaptive laboratory evolution applications forSynthetic and systems biotechnology · 2025
    Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Non-Canonical Amino Acids in Analyses of Protease Structure and Function.International journal of molecular sciences · 2023
    Review
  11. The Multiomics Response ofMicroorganisms · 2023
    Article
  12. Article
  13. Microbial adaptive evolution.Journal of industrial microbiology & biotechnology · 2022
    Review
  14. Article
  15. Non-canonical Amino Acid Substrates of E. coli Aminoacyl-tRNA Synthetases.Chembiochem : a European journal of chemical biology · 2022
    Review
  16. Article
  17. Article
  18. How To Quantify a Genetic Firewall? A Polarity-Based Metric for Genetic Code Engineering.Chembiochem : a European journal of chemical biology · 2021
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Federica AgostiniInstitute of Biochemistry-Charité Universitätsmedizin Berlin, Berlin 10117, Germany.
Ludwig SinnInstitute of Biotechnology-Bioanalytics, Technische Universität Berlin, Berlin 10623, Germany.
Daniel PetrasSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, California 92093, United States.
Christian J SchippInstitute of Chemistry-Biocatalysis, Technische Universität Berlin, Berlin 10623, Germany.
Vladimir KubyshkinInstitute of Chemistry-Biocatalysis, Technische Universität Berlin, Berlin 10623, Germany.
Allison Ann BergerInstitute of Chemistry and Biochemistry-Organic Chemistry, Freie Universität Berlin, Berlin 14195, Germany.
Pieter C DorresteinSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, California 92093, United States.
Juri RappsilberInstitute of Biotechnology-Bioanalytics, Technische Universität Berlin, Berlin 10623, Germany.
Nediljko BudisaInstitute of Chemistry-Biocatalysis, Technische Universität Berlin, Berlin 10623, Germany.
Beate KokschInstitute of Chemistry and Biochemistry-Organic Chemistry, Freie Universität Berlin, Berlin 14195, Germany.
Technische Universität Berlin · DEFreie Universität Berlin · DEUniversity of California San Diego · USCharité - Universitätsmedizin Berlin · DEWellcome Centre for Cell Biology · GB

Funding

Wellcome Trust 103139Wellcome Trust 103139/Z/13/ZWellcome Trust 108504Wellcome Trust 203149
6 · The paper itself

Abstract

Organofluorine compounds are known to be toxic to a broad variety of living beings in different habitats, and chemical fluorination has been historically exploited by mankind for the development of therapeutic drugs or agricultural pesticides. On the other hand, several studies so far have demonstrated that, under appropriate conditions, living systems (in particular bacteria) can tolerate the presence of fluorinated molecules (e.g., amino acids analogues) within their metabolism and even repurpose them as alternative building blocks for the synthesis of cellular macromolecules such as proteins. Understanding the molecular mechanism behind these phenomena would greatly advance approaches to the biotechnological synthesis of recombinant proteins and peptide drugs. However, information about the metabolic effects of long-term exposure of living cells to fluorinated amino acids remains scarce. Hereby, we report the long-term propagation of

Identifiers

PMID33532571
PMCPMC7844855
OpenAlexW3109463159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.