Evidence map›Paper›PMID 33531021›Full record

ArticleBMC medical genomics2021

An edge-based statistical analysis of long non-coding RNA expression profiles reveals a negative association between Parkinson's disease and colon cancer.

Suyan Tian, Mingyue Zhang, Zhiming Ma

Open access · goldAbstract read
In one paragraph

Article in BMC medical genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 64% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Suyan TianDivision of Clinical Research, First Hospital of Jilin University, 1 Xinmin Street, Changchun, 130021, Jilin, People's Republic of China. wmxt@jlu.edu.cn.ORCID 0000-0002-5942-1542
Mingyue ZhangDepartment of Gastroenterology, First Hospital of Jilin University, 1 Xinmin Street, Changchun, 130021, Jilin, People's Republic of China.
Zhiming MaDepartment of Gastrointestinal Nutrition and Hernia Surgery, Second Hospital of Jilin University, 218 Ziqiang Road, Changchun, 130041, Jilin, People's Republic of China. mazhiming@jlu.edu.cn.
Jilin University · CN

Funding

Education Department of Jilin Province JJKH20190032KJ
6 · The paper itself

Abstract

backgroundColon cancer (CC) is one of the most common malignant tumors, while Parkinson's disease (PD) is the second most common neurodegenerative disorder. Recent accumulating evidence indicates that these two diseases are associated with each other. Also, from the perspective of long non-coding RNAs, some well-known genes such as H19 and PVT1 can link these two diseases together. Several studies have shown that patients with PD had a decreased risk of developing CC compared with patients without PD. However, controversies surround the relationship between PD and CC, and to date, no concordant conclusion has been drawn.

methodsIn this study, we aimed to assess the association between these two diseases based on lncRNA-to-lncRNA interactions. Motivated by the weighted gene co-expression network analysis method, a customized procedure was proposed and used to identify differentially correlated edges (DCEs) in the respective interaction networks for PD and CC and explore how these two diseases are linked.

resultsOf the two sets of DCEs for PD and CC, 16 pairs overlapped. Among them, 15 edges had opposite signs, with positive signs for CC indicating a gain of connectivity, whereas negative signs for PD indicating a loss of connectivity.

conclusionsBy using the lncRNA expression profiles, and a customized procedure, an answer to the question about how PD and CC are associated is provided.

Indexed as

Colonic NeoplasmsGene Regulatory NetworksParkinson DiseaseRNA, Long NoncodingGene Expression ProfilingGene Expression Regulation, NeoplasticHumansRNA, Long NoncodingAssociationColon cancerEdgeLong non-coding RNA (lncRNA)Parkinson’s diseaseWeighted gene co-expression network (WGCNA)

Identifiers

PMID33531021
PMCPMC7851899
OpenAlexW3129024842

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.