Evidence map›Paper›PMID 33531004›Full record

ArticleMicrobial cell factories2021

Fine tuning the glycolytic flux ratio of EP-bifido pathway for mevalonate production by enhancing glucose-6-phosphate dehydrogenase (Zwf) and CRISPRi suppressing 6-phosphofructose kinase (PfkA) in Escherichia coli.

Ying Li, He Xian, Ya Xu, Yuan Zhu, Zhijie Sun, Qian Wang, Qingsheng Qi

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Ying Li *National Glycoengineering Research Center, State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Dadao, Qingdao, 266237, People's Republic of China.
He Xian *School of Chemistry and Molecular Biosciences, Faculty of Science, The University of Queensland, St Lucia, Australia.
Ya XuNational Glycoengineering Research Center, State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Dadao, Qingdao, 266237, People's Republic of China.
Yuan ZhuNational Glycoengineering Research Center, State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Dadao, Qingdao, 266237, People's Republic of China.
Zhijie SunMarine Biology Institute, Shantou University, Shantou, 515063, People's Republic of China. zjsun@stu.edu.cn.
Qian WangNational Glycoengineering Research Center, State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Dadao, Qingdao, 266237, People's Republic of China. qiqi20011983@gmail.com.ORCID http://orcid.org/0000-0003-3135-9385
Qingsheng QiNational Glycoengineering Research Center, State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Dadao, Qingdao, 266237, People's Republic of China.
Shandong University · CNQingdao University of Science and Technology · CNShantou University · CNThe University of Queensland · AU

Funding

National Natural Science Foundation of China 31670077
6 · The paper itself

Abstract

backgroundNatural glycolysis encounters the decarboxylation of glucose partial oxidation product pyruvate into acetyl-CoA, where one-third of the carbon is lost at CO

resultHere, we finely tuned the glycolytic flux ratio in two ways. First, we enhanced PPP flux for NADPH supply by replacing the promoter of zwf on the genome with a set of different strength promoters. Compared with the previous EP-bifido strains, the zwf-modified strains showed obvious differences in NADPH, NADH, and ATP synthesis levels. Among them, strain BP10BF accumulated 11.2 g/L of MVA after 72 h of fermentation and the molar conversion rate from glucose reached 62.2%. Second, pfkA was finely down-regulated by the clustered regularly interspaced short palindromic repeats interference (CRISPRi) system. The MVA yield of the regulated strain BiB1F was 8.53 g/L, and the conversion rate from glucose reached 68.7%.

conclusionThis is the highest MVA conversion rate reported in shaken flask fermentation. The CRISPRi and promoter fine-tuning provided an effective strategy for metabolic flux redistribution in many metabolic pathways and promotes the chemicals production.

Indexed as

GlycolysisAdenosine TriphosphateCarbon IsotopesCRISPR-Cas SystemsDown-RegulationEnergy MetabolismEscherichia coliFermentationGlucosephosphate DehydrogenaseMetabolic Flux AnalysisMevalonic AcidNADPPentose Phosphate PathwayPhosphofructokinasesPromoter Regions, GeneticAdenosine TriphosphateCarbon-13Carbon IsotopesGlucosephosphate DehydrogenaseMevalonic AcidNADPPhosphofructokinases

Identifiers

PMID33531004
PMCPMC7852082
OpenAlexW3123338081

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.