Evidence map›Paper›PMID 33530573›Full record

ArticleViruses2021

Epidemiological and Genetic Characterization of Sapovirus in Patients with Acute Gastroenteritis in Valencia (Spain).

Sibele de Oliveira-Tozetto, Cristina Santiso-Bellón, Josep M Ferrer-Chirivella, Noemi Navarro-Lleó, Susana Vila-Vicent, Jesús Rodríguez-Díaz, Javier Buesa

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sibele de Oliveira-TozettoDepartment of Microbiology, School of Medicine, University of Valencia, 46010 Valencia, Spain.
Cristina Santiso-BellónDepartment of Microbiology, School of Medicine, University of Valencia, 46010 Valencia, Spain.ORCID 0000-0003-1698-5062
Josep M Ferrer-ChirivellaMicrobiology Service, INCLIVA Health Research Institute, Hospital Clínico Universitario de Valencia, 46010 Valencia, Spain.
Noemi Navarro-LleóDepartment of Microbiology, School of Medicine, University of Valencia, 46010 Valencia, Spain.
Susana Vila-VicentDepartment of Microbiology, School of Medicine, University of Valencia, 46010 Valencia, Spain.
Jesús Rodríguez-DíazDepartment of Microbiology, School of Medicine, University of Valencia, 46010 Valencia, Spain.ORCID 0000-0002-9698-7684
Javier BuesaDepartment of Microbiology, School of Medicine, University of Valencia, 46010 Valencia, Spain.ORCID 0000-0002-3328-3428
Universitat de València · ESHospital Clínico Universitario de Valencia · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sapovirus is a common cause of acute gastroenteritis in all age groups. Sapovirus infections are seldom investigated in Spain, and its epidemiology in the country is not well known. The use of molecular diagnostic procedures has allowed a more frequent detection of sapoviruses in patients with diarrhea. A total of 2545 stool samples from patients with acute gastroenteritis attended from June 2018 to February 2020 at the Clinic University Hospital in Valencia, Spain, were analyzed by reverse transcription (RT) and real-time multiplex PCR (RT-PCR) to investigate the etiology of enteric infections. Sapovirus was the second enteric virus detected with a positive rate of 8%, behind norovirus (12.2%) and ahead of rotavirus (7.1%), astrovirus (4.9%) and enteric adenoviruses (2.9%). Most sapovirus infections occurred in infants and young children under 3 years of age (74%) with the highest prevalence in autumn and early winter. Coinfections were found in 25% of the patients with sapovirus diarrhea, mainly with other enteric viruses. Genotyping demonstrated the circulation of seven different genotypes during the study period, with a predominance of genotypes GI.1, GI.2, and GII.1. Phylogenetic analysis showed that genogroup GII strains form a cluster separated from genogroup GI and GV, being genotype GV.1 strains related to genotype GI.1 and GI.2 strains.

Indexed as

Age FactorsCaliciviridae InfectionsCoinfectionDiarrheaFemaleGastroenteritisGenetic VariationGenotypeHumansMaleMolecular EpidemiologyMultiplex Polymerase Chain ReactionPhylogenyPrevalenceRNA, ViralSapovirusRNA, Viralacute gastroenteritisgenotypesreal-time multiplex PCRsapovirus

Identifiers

PMID33530573
PMCPMC7911121
OpenAlexW3125540142

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.