Evidence map›Paper›PMID 33529943›Full record

ArticleJournal of biomechanics2021

A predictive multiscale model for simulating flow-induced platelet activation: Correlating in silico results with in vitro results.

Peng Zhang, Jawaad Sheriff, Shmuel Einav, Marvin J Slepian, Yuefan Deng, Danny Bluestein

Open access · greenAbstract read
In one paragraph

Article in Journal of biomechanics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Peng ZhangDepartment of Biomedical Engineering, Stony Brook University, NY 11794, United States; Department of Applied Mathematics and Statistics, Stony Brook University, NY 11794, United States. Electronic address: peng.zhang@stonybrook.edu.
Jawaad SheriffDepartment of Biomedical Engineering, Stony Brook University, NY 11794, United States.
Shmuel EinavDepartment of Biomedical Engineering, Stony Brook University, NY 11794, United States.
Marvin J SlepianDepartment of Biomedical Engineering, Stony Brook University, NY 11794, United States; Departments of Medicine and Biomedical Engineering, Sarver Heart Center, University of Arizona, AZ 85721, United States.
Yuefan DengDepartment of Applied Mathematics and Statistics, Stony Brook University, NY 11794, United States.
Danny BluesteinDepartment of Biomedical Engineering, Stony Brook University, NY 11794, United States. Electronic address: danny.bluestein@stonybrook.edu.
Stony Brook University · USUniversity of Arizona · US

Funding

Multiscale Modeling of Blood Flow and Platelet Mediated ThrombosisU01HL131052 · NHLBI · STATE UNIVERSITY NEW YORK STONY BROOK · PI BLUESTEIN, DANNY · 2016 to 2020
$3.6M
Multiscale modeling of blood flow and clotting in cardiovascular devicesR21HL096930 · NHLBI · STATE UNIVERSITY NEW YORK STONY BROOK · PI BLUESTEIN, DANNY · 2011 to 2012
$421k
NHLBI NIH HHS R21 HL096930NHLBI NIH HHS U01 HL131052
6 · The paper itself

Abstract

Flow-induced platelet activation prompts complex filopodial formation. Continuum methods fail to capture such molecular-scale mechanisms. A multiscale numerical model was developed to simulate this activation process, where a Dissipative Particle Dynamics (DPD) model of viscous blood flow is interfaced with a Coarse Grained Molecular Dynamics (CGMD) platelet model. Embedded in DPD blood flow, the macroscopic dynamic stresses are interactively transferred to the CGMD model, inducing intra-platelet associated events. The platelets activate by a biomechanical transductive linkage chain and dynamically change their shape in response. The models are fully coupled via a hybrid-potential interface and multiple time-stepping (MTS) schemes for handling the disparity between the spatiotemporal scales. Cumulative hemodynamic stresses that may lead to platelet activation are mapped on the surface membrane and simultaneously transmitted to the cytoplasm and cytoskeleton. Upon activation, the flowing platelets lose their quiescent discoid shape and evolve by forming filopodia. The model predictions were validated by a set of in vitro experiments, Platelets were exposed to various combinations of shear stresses and durations in our programmable hemodynamic shearing device (HSD). Their shape change was measured at multiple time points using scanning electron microscopy (SEM). The CGMD model parameters were fine-tuned by interrogating a parameter space established in these experiments. Segmentation of the SEM imaging streams was conducted by a deep machine learning system. This model can be further employed to simulate shear mediated platelet activation thrombosis initiation and to study the effects of modulating platelet properties to enhance their shear resistance via mechanotransduction pathways.

Indexed as

Mechanotransduction, CellularThrombosisBlood PlateletsComputer SimulationHumansPlatelet ActivationStress, MechanicalFilopodia formationMechanical transductionMultiscale simulationsPlatelet activation

Identifiers

PMID33529943
PMCPMC8590631
OpenAlexW3122535728

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.