ArticleNature biotechnology2021
Initialization is critical for preserving global data structure in both t-SNE and UMAP.
Article in Nature biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
114 citing papers in PubMed.
- Uncovering smooth structures in single-cell data with neighbor embeddings guided by predictability-computability-stability.Patterns (New York, N.Y.) · 2026Article
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- Image feature embedding with a deep learning framework improves genome-wide association studies on dog endophenotypes.Science advances · 2026Article
- Correlated clustering and projection for dimensionality reduction.Machine learning: science and technology · 2026Article
- lcUMAPtSNE: use of non-linear dimensionality reduction techniques with genotype likelihoods.BMC genomics · 2026Article
- Regression Models of Viability and Apoptosis Can be Generated Leveraging Cluster Analysis From Ovizio iLineF PRO Image Data.Biotechnology journal · 2026Article
- Immune Subtypes and Survival in Patients with Primary Glioma.medRxiv : the preprint server for health sciences · 2026Article
- GGAR: gradient guided adaptive regularization enhances deep learning classification of brassica species using codon usage bias.BMC bioinformatics · 2026Article
- Unveiling hidden intermediate states in protein folding with AI-based conditional transition clustering.Proceedings of the National Academy of Sciences of the United States of America · 2026Article
- Interactive visualization of metric distortion in nonlinear data embeddings using the distortions package.Briefings in bioinformatics · 2026Article
- Alk-Fam150b (augmentor α) expression in the paraventricular nucleus of the mouse hypothalamus at molecular resolution, and its sensitivity to acute stress.Journal of neuroendocrinology · 2026Article
- CIRCE: a scalable Python package to predict cis-regulatory DNA interactions from single-cell chromatin accessibility data.Bioinformatics (Oxford, England) · 2026Article
- SEAL: Spatially-resolved Embedding Analysis with Linked Imaging Data.IEEE transactions on visualization and computer graphics · 2026Article
- Unsupervised clustering of PET/CT features in fever of unknown origin (FUO) and inflammation of unknown origin (IUO).Frontiers in medicine · 2026Article
- Astrocytes modulate neuronal development by S100A6 signaling.Nature communications · 2025Article
- Real-time single-vessel analysis reveals vascular-type-dependent blood-brain barrier dysfunction in rodent models of status epilepticus and neuroinflammation.Neurophotonics · 2025Article
- SuperGLUE facilitates an explainable training framework for multi-modal data analysis.Cell reports methods · 2025Article
- Gesture encoding in human left precentral gyrus neuronal ensembles.Communications biology · 2025Article
- Unifying equivalences across unsupervised learning, network science, and imaging/network neuroscience.ArXiv · 2025Article
- SEAL : Spatially-resolved Embedding Analysis with Linked Imaging Data.bioRxiv : the preprint server for biology · 2025Article
54 more citing papers are in PubMed but not listed here.
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Authors and funding
2 authors.
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Abstract
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Identifiers
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.