Evidence map›Paper›PMID 33526784›Full record

ArticleNature communications2021

A glucose meter interface for point-of-care gene circuit-based diagnostics.

Evan Amalfitano, Margot Karlikow, Masoud Norouzi, Katariina Jaenes, Seray Cicek, Fahim Masum, Peivand Sadat Mousavi, Yuxiu Guo, Laura Tang, Andrew Sydor and 14 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 96 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Programming Next-Generation Synthetic Biosensors by Genetic Circuit Design.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  8. Review
  9. Article
  10. Article
  11. Gene circuit-based sensors.Fundamental research · 2025
    Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Review
  17. Article
  18. Development and field validation of a reverse transcription loop-mediated isothermal amplification assay (RT-LAMP) for the rapid detection of chikungunya virus in patient and mosquito samples.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2024
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 6 institutions in 2 countries.

Evan Amalfitano *Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.
Margot Karlikow *Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.
Masoud Norouzi *Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.
Katariina JaenesLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.
Seray CicekLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.
Fahim MasumLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.
Peivand Sadat MousaviLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.ORCID 0000-0003-0585-4200
Yuxiu GuoLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.
Laura TangLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada.ORCID 0000-0003-1817-5100
Andrew SydorProgram in Cell Biology, Hospital for Sick Children, Peter Gilgan Center for Research and Learning, Toronto, ON, M5G 0A4, Canada.ORCID 0000-0003-3585-0446
Duo MaBiodesign Center for Molecular Design and Biomimetics, The Biodesign Institute and the School of Molecular Sciences, Arizona State University, AZ, 85287, USA.
Joel D PearsonLunenfeld Tanenbaum Research Institute, Mt Sinai Hospital, Sinai Health System, Toronto, M5G 1X5, ON, Canada.
Daniel TrckaLunenfeld Tanenbaum Research Institute, Mt Sinai Hospital, Sinai Health System, Toronto, M5G 1X5, ON, Canada.
Mathieu PinetteCanadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, R3E 3M4, MB, Canada.
Aruna AmbagalaCanadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, R3E 3M4, MB, Canada.
Shawn BabiukCanadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, R3E 3M4, MB, Canada.ORCID 0000-0003-1265-7264
Bradley PickeringCanadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, R3E 3M4, MB, Canada.
Jeff WranaLunenfeld Tanenbaum Research Institute, Mt Sinai Hospital, Sinai Health System, Toronto, M5G 1X5, ON, Canada.
Rod BremnerLunenfeld Tanenbaum Research Institute, Mt Sinai Hospital, Sinai Health System, Toronto, M5G 1X5, ON, Canada.ORCID 0000-0001-9184-7212
Tony MazzulliDepartment of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, M5S 1A8, ON, Canada.
David SintonDepartment of Mechanical and Industrial Engineering, University of Toronto, Toronto, M5S 3G8, ON, Canada.
John H BrumellProgram in Cell Biology, Hospital for Sick Children, Peter Gilgan Center for Research and Learning, Toronto, ON, M5G 0A4, Canada.ORCID 0000-0002-5802-7789
Alexander A GreenBiodesign Center for Molecular Design and Biomimetics, The Biodesign Institute and the School of Molecular Sciences, Arizona State University, AZ, 85287, USA.ORCID 0000-0003-2058-1204
Keith PardeeLeslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, M5S 3M2, Canada. keith.pardee@utoronto.ca.ORCID 0000-0002-3812-8013
University of Toronto · CACanadian Food Inspection Agency · CAArizona State University · USBoston University · USHospital for Sick Children · CALunenfeld-Tanenbaum Research Institute · CA

Funding

ZINC DEFICIENCY &PROTEIN EXPRESSION IN RAT OLFACTORY BULBSP41RR005351 · NCRR · UNIVERSITY OF GEORGIA (UGA) · PI VENOT, ANDRE · 1989 to 2011
$18.4M
Rapid Low-Cost Paper-based Biodosimetry that reveals individual organ injuriesU01AI148319 · NIAID · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI LABAER, JOSHUA · 2020 to 2024
$2.5M
Molecular Fuses for Real-Time, Label-Free, Multiplexed Imaging of RNAs in Living CellsDP2GM126892 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI GREEN, ALEXANDER ARTHUR · 2017 to 2017
$2.3M
Programmable electrochemical gene circuit sensors for infectious disease detectionR21AI136571 · NIAID · UNIVERSITY OF TORONTO · PI GREEN, ALEXANDER ARTHUR, KELLEY, SHANA O · 2018 to 2019
$300k
CIHR 201610FDN-375469CIHR 950-231075NCRR NIH HHS P41 RR005351NIAID NIH HHS R21 AI136571NIAID NIH HHS U01 AI148319NIGMS NIH HHS DP2 GM126892
6 · The paper itself

Abstract

Recent advances in cell-free synthetic biology have given rise to gene circuit-based sensors with the potential to provide decentralized and low-cost molecular diagnostics. However, it remains a challenge to deliver this sensing capacity into the hands of users in a practical manner. Here, we leverage the glucose meter, one of the most widely available point-of-care sensing devices, to serve as a universal reader for these decentralized diagnostics. We describe a molecular translator that can convert the activation of conventional gene circuit-based sensors into a glucose output that can be read by off-the-shelf glucose meters. We show the development of new glucogenic reporter systems, multiplexed reporter outputs and detection of nucleic acid targets down to the low attomolar range. Using this glucose-meter interface, we demonstrate the detection of a small-molecule analyte; sample-to-result diagnostics for typhoid, paratyphoid A/B; and show the potential for pandemic response with nucleic acid sensors for SARS-CoV-2.

Indexed as

Point-of-Care SystemsPoint-of-Care TestingBiosensing TechniquesCOVID-19Gene Regulatory NetworksGlucoseHumansNucleic AcidsPandemicsSARS-CoV-2Typhoid FeverGlucoseNucleic Acids

Identifiers

PMID33526784
PMCPMC7851131
OpenAlexW3128641117

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.