Evidence map›Paper›PMID 33526782›Full record

ArticleTranslational psychiatry2021

Combined effects of genotype and childhood adversity shape variability of DNA methylation across age.

Darina Czamara, Elleke Tissink, Johanna Tuhkanen, Jade Martins, Yvonne Awaloff, Amanda J Drake, Batbayar Khulan, Aarno Palotie, Sibylle M Winter, Charles B Nemeroff and 14 more

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

  1. Pooled it
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  13. Considerations toward an epigenetic and common pathways theory of mental disorder.Journal of psychopathology and clinical science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 12 institutions in 7 countries.

Darina CzamaraDepartment of Translational Research in Psychiatry, Max Planck Institute of Psychiatry, Kraepelinstr. 2-10, 80804, Munich, Germany. darina@psych.mpg.de.ORCID 0000-0001-7381-904X
Elleke TissinkDepartment of Complex Trait Genetics, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, 1081 HV, Amsterdam, The Netherlands.ORCID 0000-0003-4225-9347
Johanna TuhkanenDepartment of Psychology and Logopedics, Faculty of Medicine, University of Helsinki, Haartmaninkatu 3, 00014, Helsinki, Finland.
Jade MartinsDepartment of Translational Research in Psychiatry, Max Planck Institute of Psychiatry, Kraepelinstr. 2-10, 80804, Munich, Germany.ORCID 0000-0001-6528-8947
Yvonne AwaloffSopra Steria, 80804, Munich, Germany.
Amanda J DrakeUniversity/British Heart Foundation Centre for Cardiovascular Science, Queen's Medical Research Institute, Edinburgh BioQuarter, University of Edinburgh, 47 Little France Crescent, Edinburgh, EH16 4TJ, UK.ORCID 0000-0001-8633-333X
Batbayar KhulanUniversity/British Heart Foundation Centre for Cardiovascular Science, Queen's Medical Research Institute, Edinburgh BioQuarter, University of Edinburgh, 47 Little France Crescent, Edinburgh, EH16 4TJ, UK.
Aarno PalotieInstitute for Molecular Medicine Finland (FIMM), University of Helsinki, 00014, Helsinki, Finland.
Sibylle M WinterDepartment of Child and Adolescent Psychiatry, Charité-Universitätsmedizin Berlin, Campus Virchow, 13353, Berlin, Germany.
Charles B NemeroffDepartment of Psychiatry, Dell Medical School, University of Texas at Austin, 1601 Trinity St, Austin, TX, 78712, USA.
W Edward CraigheadDepartment of Psychiatry and Behavioral Sciences, Emory University School of Medicine, 12 Executive Park Dr, Atlanta, GA, 30329, USA.ORCID 0000-0001-9957-0027
Boadie W DunlopDepartment of Psychiatry and Behavioral Sciences, Emory University School of Medicine, 12 Executive Park Dr, Atlanta, GA, 30329, USA.ORCID 0000-0002-4653-0483
Helen S MaybergDepartment of Psychiatry and Behavioral Sciences, Emory University School of Medicine, 12 Executive Park Dr, Atlanta, GA, 30329, USA.
Becky KinkeadDepartment of Psychiatry and Behavioral Sciences, Emory University School of Medicine, 12 Executive Park Dr, Atlanta, GA, 30329, USA.ORCID 0000-0003-0169-6989
Sanjay J MathewMenninger Department of Psychiatry and Behavioral Sciences, Baylor College of Medicine Mental Health Care Line, Michael E. Debakey VA Medical Center, Houston, TX, USA.ORCID 0000-0002-2715-6641
Dan V IosifescuIcahn School of Medicine at Mount Sinai, 1 Gustave L. Levy PI, New York, NY, 10029, USA.
Thomas C NeylanDepartments of Psychiatry and Neurology, University of California, San Francisco, CA, USA.
Christine M HeimCharité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Berlin Institute of Health (BIH), Institute of Medical Psychology, Luisenstraße 57, 10117, Berlin, Germany.ORCID 0000-0002-6580-6326
Jari LahtiDepartment of Psychology and Logopedics, Faculty of Medicine, University of Helsinki, Haartmaninkatu 3, 00014, Helsinki, Finland.ORCID 0000-0002-4310-5297
Johan G ErikssonDepartment of General Practice and Primary Health Care, Helsinki University Hospital, University of Helsinki, 00290, Helsinki, Finland.
Katri RäikkönenDepartment of Psychology and Logopedics, Faculty of Medicine, University of Helsinki, Haartmaninkatu 3, 00014, Helsinki, Finland.
Kerry J ResslerMailman Research Center, 115 Mill St., Mailstop 339, Belmont, MA, 02478, USA.ORCID 0000-0002-5158-1103
Nadine ProvençalFaculty of Health Sciences, Simon Fraser University, 8888 University Drive, Burnaby, BC, Canada.
Elisabeth B BinderDepartment of Translational Research in Psychiatry, Max Planck Institute of Psychiatry, Kraepelinstr. 2-10, 80804, Munich, Germany. binder@psych.mpg.de.ORCID 0000-0001-7088-6618
Emory University · USUniversity of Helsinki · FIBritish Heart Foundation · GBMax Planck Institute of Psychiatry · DEAmsterdam Neuroscience · NLCharité - Universitätsmedizin Berlin · DEHumboldt-Universität zu Berlin · DEMichael E. DeBakey VA Medical Center · USNathan Kline Institute for Psychiatric Research · USSimon Fraser University · CAThe University of Texas at Austin · USUniversity of California, San Francisco · US

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025008 · NCRR · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2007 to 2011
$29.0M
X LINKED NYSTAGMUS SYNDROME WITH FEATURES OF ALBINISMM01RR000039 · NCRR · EMORY UNIVERSITY · PI VACCARINO, VIOLA · 1985 to 2007
$21.3M
Projevt 5: Effects of the CRF1 receptor antagonist in patients w/PTSD: a plcebocoU19MH069056 · NIMH · EMORY UNIVERSITY · PI MAYBERG, HELEN S · 2003 to 2013
$15.4M
Special Scientific Procedures: Statistical Modeling CoreP50MH077083 · NIMH · EMORY UNIVERSITY · PI MAYBERG, HELEN S · 2006 to 2010
$9.3M
Genetic and Trauma-Related Risk Factors for PTSDR01MH071537 · NIMH · EMORY UNIVERSITY · PI RESSLER, KERRY J. · 2005 to 2014
$8.5M
Predictors of Treatment Response Relapse and Recurrence in Major DepressionR01MH080880 · NIMH · EMORY UNIVERSITY · PI CRAIGHEAD, W. EDWARD · 2008 to 2012
$6.6M
Epigenetic signatures linking maternal adversity and infant neurobiologyR21HD100902 · NICHD · MCLEAN HOSPITAL · PI LYONS-RUTH, KARLEN, RESSLER, KERRY J. · 2020 to 2021
$486k
NCRR NIH HHS M01 RR000039NCRR NIH HHS UL1 RR025008NICHD NIH HHS R21 HD100902NIMH NIH HHS P50 MH077083NIMH NIH HHS R01 MH071537NIMH NIH HHS R01 MH080880NIMH NIH HHS U19 MH069056Wellcome Trust
6 · The paper itself

Abstract

Lasting effects of adversity, such as exposure to childhood adversity (CA) on disease risk, may be embedded via epigenetic mechanisms but findings from human studies investigating the main effects of such exposure on epigenetic measures, including DNA methylation (DNAm), are inconsistent. Studies in perinatal tissues indicate that variability of DNAm at birth is best explained by the joint effects of genotype and prenatal environment. Here, we extend these analyses to postnatal stressors. We investigated the contribution of CA, cis genotype (G), and their additive (G + CA) and interactive (G × CA) effects to DNAm variability in blood or saliva from five independent cohorts with a total sample size of 1074 ranging in age from childhood to late adulthood. Of these, 541 were exposed to CA, which was assessed retrospectively using self-reports or verified through social services and registries. For the majority of sites (over 50%) in the adult cohorts, variability in DNAm was best explained by G + CA or G × CA but almost never by CA alone. Across ages and tissues, 1672 DNAm sites showed consistency of the best model in all five cohorts, with G × CA interactions explaining most variance. The consistent G × CA sites mapped to genes enriched in brain-specific transcripts and Gene Ontology terms related to development and synaptic function. Interaction of CA with genotypes showed the strongest contribution to DNAm variability, with stable effects across cohorts in functionally relevant genes. This underscores the importance of including genotype in studies investigating the impact of environmental factors on epigenetic marks.

Indexed as

DNA MethylationEpigenesis, GeneticAdultEpigenomicsFemaleGenotypeHumansInfant, NewbornPregnancyRetrospective Studies

Identifiers

PMID33526782
PMCPMC7851167
OpenAlexW3127348240

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.