Evidence map›Paper›PMID 33525047›Full record

ArticleThe New phytologist2021

Fire alters plant microbiome assembly patterns: integrating the plant and soil microbial response to disturbance.

Nicholas C Dove, Dawn M Klingeman, Alyssa A Carrell, Melissa A Cregger, Christopher W Schadt

Erratum issuedAbstract read
In one paragraph

Article in The New phytologist, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Corrigendum.The New phytologist · 2022
    Article
  17. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Nicholas C DoveBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.ORCID 0000-0003-1152-956X
Dawn M KlingemanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.ORCID 0000-0002-4307-2560
Alyssa A CarrellBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.ORCID 0000-0003-1142-4709
Melissa A CreggerBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.ORCID 0000-0001-8329-366X
Christopher W SchadtBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.ORCID 0000-0001-8759-2448

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is increasingly evident that the plant microbiome is a strong determinant of plant health. While the ability to manipulate the microbiome in plants and ecosystems recovering from disturbance may be useful, our understanding of the plant microbiome in regenerating plant communities is currently limited. Using 16S ribosomal RNA (rRNA) gene and internal transcribed spacer (ITS) region amplicon sequencing, we characterized the leaf, stem, fine root, rhizome, and rhizosphere microbiome of < 1-yr-old aspen saplings and the associated bulk soil after a recent high-intensity prescribed fire across a burn severity gradient. Consistent with previous studies, we found that soil microbiomes are responsive to fire. We extend these findings by showing that certain plant tissue microbiomes also change in response to fire. Differences in soil microbiome compositions could be attributed to soil chemical characteristics, but, generally, plant tissue microbiomes were not related to plant tissue elemental concentrations. Using source tracking modeling, we also show that fire influences the relative dominance of microbial inoculum and the vertical inheritance of the sapling microbiome from the parent tree. Overall, our results demonstrate how fire impacts plant microbiome assembly, diversity, and composition and highlights potential for further research towards increasing plant fitness and ecosystem recovery after fire events.

Indexed as

MicrobiotaSoilBacteriaPlant RootsRhizosphereRNA, Ribosomal, 16SSoil MicrobiologyRNA, Ribosomal, 16SSoil16S rRNAinternal transcribed spacer (ITS)microbial community assemblymicrobial source trackingmicrobiomesphyllosphereplant-microbe interactionsrhizosphere

Identifiers

PMID33525047
PMCPMC8251558

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.