Evidence map›Paper›PMID 33524011›Full record

ArticlePLoS genetics2021

The conserved transmembrane protein TMEM-39 coordinates with COPII to promote collagen secretion and regulate ER stress response.

Zhe Zhang, Shuo Luo, Guilherme Oliveira Barbosa, Meirong Bai, Thomas B Kornberg, Dengke K Ma

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  5. Antiaging Effect of 2-Foods (Basel, Switzerland) · 2025
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  7. Article
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  10. Article
  11. Knockout ofInternational journal of ophthalmology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Zhe ZhangSchool of Basic Medical Sciences, Cheeloo College of Medicine, Shandong University, Jinan, China.ORCID 0000-0003-3616-6224
Shuo LuoCardiovascular Research Institute, University of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0001-6100-5460
Guilherme Oliveira BarbosaCardiovascular Research Institute, University of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0002-5881-0896
Meirong BaiCardiovascular Research Institute, University of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0002-5919-7464
Thomas B KornbergCardiovascular Research Institute, University of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0002-6879-7066
Dengke K MaCardiovascular Research Institute, University of California San Francisco, San Francisco, California, United States of America.ORCID 0000-0002-5619-7485
University of California, San Francisco · USShandong University · CN

Funding

Molecular Mechanisms in DevelopmentR35GM122548 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI THOMAS B. KORNBERG · 2017 to 2026
$8.8M
Dissecting a Novel Genetic Pathway for Fatty Acid Desaturation and Temperature AdaptationR01GM117461 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MA, DENGKE · 2016 to 2020
$1.6M
NIGMS NIH HHS R01 GM117461NIGMS NIH HHS R35 GM122548
6 · The paper itself

Abstract

Dysregulation of collagen production and secretion contributes to aging and tissue fibrosis of major organs. How procollagen proteins in the endoplasmic reticulum (ER) route as specialized cargos for secretion remains to be fully elucidated. Here, we report that TMEM39, an ER-localized transmembrane protein, regulates production and secretory cargo trafficking of procollagen. We identify the C. elegans ortholog TMEM-39 from an unbiased RNAi screen and show that deficiency of tmem-39 leads to striking defects in cuticle collagen production and constitutively high ER stress response. RNAi knockdown of the tmem-39 ortholog in Drosophila causes similar defects in collagen secretion from fat body cells. The cytosolic domain of human TMEM39A binds to Sec23A, a vesicle coat protein that drives collagen secretion and vesicular trafficking. TMEM-39 regulation of collagen secretion is independent of ER stress response and autophagy. We propose that the roles of TMEM-39 in collagen secretion and ER homeostasis are likely evolutionarily conserved.

Indexed as

AnimalsAutophagyCaenorhabditis elegansCaenorhabditis elegans ProteinsCollagenCOP-Coated VesiclesDrosophilaEndoplasmic ReticulumEndoplasmic Reticulum StressFat BodyGene Knockdown TechniquesGolgi ApparatusHeLa CellsHumansMembrane ProteinsProtein BindingCaenorhabditis elegans ProteinsCollagenMembrane Proteinssec-23 protein, C elegansVesicular Transport Proteins

Identifiers

PMID33524011
PMCPMC7901769
OpenAlexW3126240036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.